Geomonas paludis: M1B72_19310
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Entry
M1B72_19310 CDS
T08160
Name
(GenBank) transpeptidase family protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
gpl
Geomonas paludis
Pathway
gpl00550
Peptidoglycan biosynthesis
gpl01100
Metabolic pathways
gpl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M1B72_19310
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_19310
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
M1B72_19310
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gpl03036
]
M1B72_19310
Enzymes [BR:
gpl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M1B72_19310
Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
M1B72_19310
Chromosome and associated proteins [BR:
gpl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M1B72_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UPU35563
LinkDB
All DBs
Position
complement(4513311..4515275)
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AA seq
654 aa
AA seq
DB search
MIDKWEKWARVRMRFVALLFVGFFIAASGRAFYLQVLDNDKLVKIAEKQHQKSIPLTPSR
GGIYDRNNAPFAVSIEMDSCYAETRNMENVSEAAAQLAPALGCSKEELEAKLKAARNFVW
LARRMPPEQAKRVKALDLEGVGFVKESRRFYPNSQVAAHVIGFTGLDPSGLEGVEKKYDN
IILGNTGYLVTERDALGRDIALKKGSEGKAGSKGSNVVLTLDKNIQYIAEKELTKTIEKN
GAKAGIAIVMEPDTGRVLAMANYPSFNPNNVKELTPGSIRNRAIADSFEPGSTFKIFLVA
AALEAGVIRPGDSFNCENGSCNMYGRTIHDTHKYGALTVPQVLKYSSNIGAAKIGQRLGP
QRLFTALTGFGFGERSSIDLPGEVAGMLRPQEKWYGIDLATISFGQGVTATALQLTAAVS
AVANGGNLMKPYLVDRIVDDEGVVLQQFGPQLKRRVISPETAKTVAHMLEGVVGEGGTGT
GAAVDGYRVAGKTGTAQKVEGRSYSASKRIGSFVGFVPVEKPRLAIMVMVDEPTANVYGG
VVAAPAFSAIAQQTLCYLNVPPDKSIKKKQAPAPEKVTPQAEQAVVEGGTVEGADAGAMP
NFRGMSMRQVLRVMEQRGLNVKLQGSGRAVEQNPPPGARITTQDQVWVRFVPSA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacaagtgggagaaatgggccagggtccgcatgcgcttcgtggctctgctcttc
gtcggattcttcatcgcggccagcgggcgcgccttctacctgcaggtcctggacaacgac
aagctggtgaagatcgccgagaagcagcaccagaagagcatcccgctcacccccagccgc
ggcgggatctacgatcgtaacaacgcccccttcgcggtctccatcgagatggactcctgc
tacgccgagaccaggaacatggagaacgtctccgaggcggcggcgcagctggcgccggcg
ctgggctgctcgaaggaggagctggaggcgaaactgaaggcggccaggaacttcgtctgg
ctggcccgcaggatgccccccgagcaggcgaaaagggtgaaggcgctggacctggagggg
gtcggcttcgtgaaggaaagccgccgcttctaccccaactcgcaggtcgcagcccatgtg
ataggcttcaccggtctggaccccagcggcctggaaggggtcgagaagaagtacgacaac
atcatcctcggcaacaccggttacctggtcaccgagcgcgacgccctcgggcgcgacatc
gctctcaagaaggggagcgaagggaaggccggctccaaggggagcaacgtcgtcctcacc
ctggacaagaacatccagtacatagcggagaaggagctcaccaagaccatcgagaaaaac
ggtgccaaggcgggcatcgccatcgtgatggagcccgacaccgggcgggtgctggccatg
gccaactacccctccttcaacccgaacaacgtcaaggaactgaccccggggtcgatcagg
aaccgcgccatcgccgacagcttcgaacccggctccaccttcaagatcttcctggtggcg
gcggcgctggaagcgggggtgatccgccccggcgacagtttcaactgtgagaacggctcc
tgcaacatgtacggcaggaccatccacgacacgcacaagtacggtgcgctgaccgtgccg
caggttctcaagtactcgagcaacatcggcgccgccaagatcggccagaggctcggcccg
cagcgcctgttcacggcgctcaccgggttcgggttcggtgagaggagcagcatcgacctc
cccggcgaagtggccgggatgctccgcccgcaggagaaatggtacggcatcgacctggcc
accatctccttcggccagggggtgaccgccaccgccctgcagctgaccgccgcggtttcc
gccgtcgccaacggcggcaacctgatgaagccctacctggtggaccggatcgtggacgac
gagggggtggtcctgcaacagttcgggccccagttgaagagaagggtgatctcgccggag
acggccaagaccgtggcccacatgctcgagggggtcgtgggggaaggcgggaccggcacc
ggggccgcggtcgacggctaccgggtcgcgggcaagaccggcaccgcccagaaggtcgag
gggcgcagctactcggccagcaagcgcatcgggtccttcgtaggcttcgtgccggtcgag
aagcccaggctggccatcatggtgatggtggacgagccgaccgccaacgtctacggcggt
gtcgttgccgcgccggccttcagcgccatcgcacagcagaccctgtgctacctgaacgtg
ccgccggacaaaagcatcaagaagaagcaggcaccggcccccgagaaggtcaccccgcag
gcggagcaggcggtggtcgagggggggacggtggaaggggcggacgccggggccatgccc
aacttccgcggcatgagcatgaggcaggtgctgagggtcatggaacagcgcggcctcaac
gtcaagctgcagggaagcggccgggcggtggagcagaacccgccgccgggagcccgcatc
accacgcaggaccaggtctgggtgcgcttcgtgccgtcggcctga
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