Geomonas paludis: M1B72_19660
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Entry
M1B72_19660 CDS
T08160
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpl03016
]
M1B72_19660
Enzymes [BR:
gpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
M1B72_19660
Transfer RNA biogenesis [BR:
gpl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
M1B72_19660
Prokaryotic type
M1B72_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UPU35630
LinkDB
All DBs
Position
complement(4608571..4609659)
Genome browser
AA seq
362 aa
AA seq
DB search
MPKPFRYLEPTFFAGLFDDPLLLIRVRPTGRALLFDCGKMHHLAKRVYTSIDAIFISHAH
MDHFMGMDSVIRHSHASPRTIDVFGPPGLSKRMANKFACYDWNLADTFWGNFRVNEVGAN
GRVASTLYSGPEAFLASSEGERNGVLYGNRHLTVSGTQCEHHIPVMAYRIDEGAAFVLDD
ERMAAEGIKKGEWLKDMEKLFHDGVMEGSPVKYLHDSGGSIEEKVAPDAAKLYQRIRMFE
EPASIGYVTDIGYSEENVAKLAGLVQGVTLLVCECAFLASESKKAGVSRHLCTTQFNQLL
DRLRPKYVLPMHFSKTYQRGSEPLYQEIEPPPGVTVLKIPDRLTPRPIMESEVPRPVELQ
RH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacctttccgctacctcgaacccaccttctttgcaggactcttcgacgacccg
ctgcttttaatccgggtacgtccgaccggccgcgcacttttattcgactgcggcaagatg
catcacctcgccaagagggtctacacatccatcgacgccatcttcatcagtcacgcccac
atggaccacttcatgggaatggacagcgtaatccgccacagccacgcctcgccgcgcacc
atcgacgtcttcggcccgccggggctgtcaaagcgcatggctaacaagttcgcctgctac
gactggaacctcgccgataccttctggggcaatttcagggtcaacgaggtcggtgcaaac
ggacgggtcgcaagcactctctacagcggccccgaagccttcctggccagttccgagggg
gagcgcaacggtgtcctctacggcaaccgccatctcaccgtgagcgggacccagtgcgag
catcacattccggtcatggcctaccgcatcgacgagggcgccgccttcgtgctcgatgac
gagcgcatggcggctgaagggataaagaagggcgagtggctcaaggatatggagaagctg
tttcacgacggcgtgatggaggggagcccggtgaagtacctgcacgacagcggcgggagc
atcgaagagaaggttgcgccggatgccgcgaagttgtaccagcgcatcaggatgttcgaa
gagcccgccagcatcggttacgtaacggacatcggttattccgaggagaacgtggcgaag
ctggccgggctggtgcagggggtgacgctgttggtgtgtgagtgtgccttcctcgcgtcc
gagtcaaaaaaggccggggtgtcccgtcatctctgcacgacacagttcaaccagttgctg
gaccggctgcgcccgaaatacgtgttgccgatgcatttctccaagacctaccagaggggg
agcgagccgttgtaccaggagatcgagcccccgcccggcgtcaccgtgctgaagatcccc
gaccgcctcaccccccgccccatcatggaaagcgaggtcccgcggcccgtcgaactgcaa
aggcattaa
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