Geomonas paludis: M1B72_20705
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Entry
M1B72_20705 CDS
T08160
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gpl
Geomonas paludis
Pathway
gpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1B72_20705 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpl03019
]
M1B72_20705 (groL)
03110 Chaperones and folding catalysts [BR:
gpl03110
]
M1B72_20705 (groL)
03029 Mitochondrial biogenesis [BR:
gpl03029
]
M1B72_20705 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpl04147
]
M1B72_20705 (groL)
Enzymes [BR:
gpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
M1B72_20705 (groL)
Messenger RNA biogenesis [BR:
gpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M1B72_20705 (groL)
Chaperones and folding catalysts [BR:
gpl03110
]
Heat shock proteins
HSP60 / Chaperonin
M1B72_20705 (groL)
Mitochondrial biogenesis [BR:
gpl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
M1B72_20705 (groL)
Exosome [BR:
gpl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M1B72_20705 (groL)
Exosomal proteins of other body fluids (saliva and urine)
M1B72_20705 (groL)
Exosomal proteins of breast cancer cells
M1B72_20705 (groL)
Exosomal proteins of colorectal cancer cells
M1B72_20705 (groL)
Exosomal proteins of bladder cancer cells
M1B72_20705 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UPU35833
UniProt:
A0A6V8MR50
LinkDB
All DBs
Position
complement(4857106..4858758)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKIIKFDQDARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEI
ELDDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGL
DQAVEVLVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAQAMEKVGKEGVITVEEA
KAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMDNVAILIHDKKISNMKDLLPVLEQT
AKSGRPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGKV
ISEEVGFRLENTTIDMLGNAKKITVDKDNTTIIDGYGAEADIQGRVKMIRAQIEETTSDY
DREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYL
RALKVLDNLELAPEQQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKGGQEAFGYNAA
DDVYVDMIQAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPRDESAMPAMPGGMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatcatcaaattcgaccaggacgcacgcaactgcatccttaaaggtgtc
aacaccctggcagatgcggttaaagtgaccctggggcctaaagggcgcaacgtcgtcatc
gagaaatcctacggcgcaccgctcatcaccaaggacggcgttaccgtcgccaaggaaatc
gagctggacgacaagttcgagaacatgggtgcgcagctggtgaaggaagttgcctccaag
acctccgatgtcgccggtgacggcaccaccactgctaccgtgctggcccaggccatctac
cgtcagggcgccaagctggtcgctgccggccacaacccgatggagatcaagcgcggtctg
gaccaggccgtcgaagtgctggtcgccgaactgaagaacatctccaagccgatcaaggac
cacaaggaaatcgcacaggtcggcaccatctccgccaacaacgacaagaccatcggcgac
atcatcgcccaggccatggagaaggtcggcaaggaaggggtcatcaccgtcgaggaagcc
aaagcgatggagaccacccttgagaccgtcgagggcatgcagttcgaccgcggctacctc
tctccgtacttcgtgaccgatccggagcgcatggaagcggccatggacaacgtcgccatc
ctgatccacgacaagaagatctccaacatgaaggacctcctcccggttctcgagcagacc
gccaagtccggccgtccgctgctcatcatcgccgaggacatcgagggcgaggccctggct
accctggtggtcaacaagctgcgcggcgtcctgaacgtctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaaggtg
atctccgaggaagtcggtttcaggctcgaaaacaccaccatcgacatgctgggtaacgcc
aagaagatcaccgtcgacaaggacaacaccaccatcatcgacggctacggtgcggaagcc
gacatccagggccgcgtcaagatgatccgtgcccagatcgaggaaaccacctcggactac
gaccgtgagaagctccaggagcgtctggccaagctggtcggcggcgttgccgtgatcaag
gtcggcgcggccaccgagatcgagatgaaagagaagaaggcacgcgtcgaggacgctctg
cacgcaacccgcgcggctgtcgacgagggcatcgtccctggcggcggcgtcgcttacctg
cgcgctctgaaggtgctggacaacctcgagctcgctccggagcagcagttcggcgtcaac
gtgatcaagcgcgccctcgaggagccgatccgtcagatcgcacagaacgcaggcgtcgac
ggctccatcgtcgttgacaaggtgaaaggcggccaggaggccttcggctacaacgcagcc
gacgacgtctacgtcgacatgatccaggccggcatcatcgacccgaccaaggtctccagg
agcgctctgcagaacgccgcttccgttgccggtctcatgatgaccaccgaggctatgatc
gctgacaagccgagggatgagtccgctatgccggcgatgccgggtggcatgggcggcatg
ggtggcatgggcggcatgggcggcatgatgtaa
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