Geomonas paludis: M1B72_20975
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Entry
M1B72_20975 CDS
T08160
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gpl
Geomonas paludis
Pathway
gpl03420
Nucleotide excision repair
gpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M1B72_20975
03430 Mismatch repair
M1B72_20975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_20975
Enzymes [BR:
gpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M1B72_20975
DNA repair and recombination proteins [BR:
gpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M1B72_20975
MMR (mismatch excision repair)
Other MMR factors
M1B72_20975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
QueH
Motif
Other DBs
NCBI-ProteinID:
UPU35883
LinkDB
All DBs
Position
complement(4929687..4931891)
Genome browser
AA seq
734 aa
AA seq
DB search
MKLLHKLNPPQQEAVLHGEGPLLVLAGAGSGKTRVIVHRIGYLIHERGVPPWQILAVTFT
NKAAGEMRERIQHMLGEGETPIVSTFHSTCARILRSDIRSLGYDSNFAIYDDKDCERLLK
DCAAEMNLDEKRYPVKMLGSAIDEFKNQGMSPFDVPADSPYQATLARVYRCYQERLKRCN
AVDFGDLLLLTVQLFEEHKEVLDKYLQRWRWLLVDEYQDTNPVQYRLVQLLAGARQNLCV
VGDDDQSIYGWRGADIRNILEFEKDFPGVKVVKLEQNYRSTKTILDGAWHVVQKNKGRKP
KRLWTDNPEGERIVYRTLPNEWEEGRTVCREIERFLAEGGDLSEVAVFYRTNAQSRVIEE
ALVGAQIAHHMVGGVRFYARLEIKDILAYLKVLDNPSDDVAVKRIINTPPRGIGNTTVQK
IADFANEKGLPFYDAMLEGAYGPLLPAAARGKVAAFVNELEGYKTLSEKLPLSELTAAVI
NDSGYYARLKLQRTEEAQERIDNLQELVTAMQTYESMPGEHGLADFLERVALVSDLEHEG
EGKKSSATLMTLHSAKGLEFQLVFMIGMEEKLFPHVRALENPEQMEEERRLCYVGMTRAK
KRLFLLNVRRRHIFGQEQMNAPARFIADIPKNLLDSGDLWQRAEPSRDFSAGHNLASLFE
EEIEPEFEDNEVRMVPDDEDDGIWVGMKVRHAQFGPGTIRKIEGEGDNQKVIVWFNSLGG
PKKLLVRFAGLERA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctccacaaactgaaccctccccagcaggaggccgtgctgcacggcgaggga
ccgctgctggtcctggccggcgccggctccggcaagacccgcgtcatcgtgcaccgcatt
ggctacttgattcacgagcgcggcgtccccccctggcagatcctggccgtcaccttcacc
aacaaggccgccggagagatgcgcgagcgcatccagcacatgctgggggagggggaaacc
cccatcgtctccacctttcactccacctgcgcccgcatcctgcgaagcgacatcaggagc
ctcggctacgactccaatttcgccatctacgacgataaggactgcgagcgtctgctgaag
gactgcgccgccgagatgaacctggatgagaaacgctacccggtgaagatgctggggagc
gccatcgacgagttcaagaaccaggggatgagccccttcgacgtcccggccgactccccg
taccaggcgacgctggcccgggtctaccgctgctaccaggagcgcctcaagcgctgcaac
gccgtcgatttcggcgacctgctcctgttgacggtgcaactcttcgaggagcacaaggag
gtgctggacaagtacctgcagcgctggcgctggctcctcgtcgatgagtaccaggacacc
aacccggtgcagtaccgcctggtgcagcttctggccggcgcgcgccagaacctctgcgtg
gtcggcgacgacgaccagtccatctacggctggcgcggcgcggacatccgcaacatcctc
gaattcgagaaggacttccccggggtcaaggtggtgaagctggagcagaattaccgctcc
accaagaccatcctggacggcgcctggcacgtggtgcagaagaacaaggggagaaagccc
aagcgcctctggaccgacaaccccgagggggagcgcatcgtgtaccgtaccctccccaac
gagtgggaggaggggcgcaccgtctgccgcgagatcgaacgcttcctcgccgaggggggc
gacctctccgaggtggcggtcttctatcgcaccaacgcccagtcccgcgtcatcgaggaa
gccctggtgggggcgcagatcgcgcaccacatggtcggcggcgtccgcttctatgcgcga
ctcgagataaaggacatcctcgcttacctgaaggtgctggacaacccttccgacgacgtg
gcggtgaagaggatcatcaacacgccgccgcgcggcatcggcaacaccacggtccagaag
atcgccgatttcgccaacgaaaaggggctccctttctacgacgcgatgctggaaggggcc
tacgggccgctgctcccggccgccgcgcgcggcaaggtggccgccttcgtcaacgagctg
gaggggtacaagaccctgagcgaaaagctccccctgtccgagctcaccgccgccgtcatc
aacgattccggctactatgcccggctcaagctgcagcggaccgaggaggcccaggagcgg
atcgacaacctccaggagctggtgaccgccatgcagacctacgaaagcatgccgggcgag
cacgggctggcagacttcctggagcgggtggcgctggtctccgacctcgagcacgagggt
gagggaaagaagtcttccgcgacgctgatgaccctgcactcggccaaagggttggaattc
cagctggtcttcatgatcggcatggaagagaagctgttcccccacgtgcgcgccctggaa
aatccggagcagatggaagaggaaagaaggctctgctacgtcggcatgacccgcgccaag
aagcgcctgttcctcctgaacgtgcgccggcgccacatcttcgggcaggagcagatgaac
gcccccgcccgcttcatcgccgacatcccgaagaacctgttggacagcggcgacctctgg
cagcgcgccgagccttcgcgcgacttctccgccggccacaacctggcttcgctgttcgag
gaggagatcgagccggagttcgaggacaacgaggtgcgcatggtccccgacgacgaggac
gacggcatctgggtcggcatgaaggtgcgccacgcccagttcggcccgggcaccatccgg
aagatcgagggggagggggacaaccagaaggtgatcgtctggttcaactcactcggcggg
cccaagaagctgctggtgcgctttgccggtcttgagcgggcctga
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