KEGG   Geomonas paludis: M1B72_21125
Entry
M1B72_21125       CDS       T08160                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gpl  Geomonas paludis
Brite
KEGG Orthology (KO) [BR:gpl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpl02048]
    M1B72_21125
Enzymes [BR:gpl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     M1B72_21125
Prokaryotic defense system [BR:gpl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   M1B72_21125
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD HSDR_N Helicase_C SNCAIP_SNCA_bd
Other DBs
NCBI-ProteinID: UPU35913
LinkDB
Position
complement(4995588..4998362)
AA seq 924 aa
MTPEAKARVQIDRKLEDAGWIIQDFRQANLGAGVGVVVREYPTDTGPADYLLFVNRQPVG
VIEAKPDNTILTFVEEQTERYAKSSLKWCLNTEPLPFLYESTGQVSRFTEARDPAPRSRE
VFHFHRPELLAEWIEQRETLRRRLAEQMPELQTRNLRECQVDAVRGLEKSLAQNRPRALV
QMATGAGKTFTAITSVYRLLKYAGARRILFLVDTRNLGKQAHQEFHAYTPPDDPRKFTEL
YNVQRLTSASLDPHAQVCISTIQRLYSMLRGEPLDESAEDISLNELVQTEKQEKLVVYNP
AIPVETFDFIIVDECHRSIYNLWKQVLDYFDAFLIGLTATPDKRTFGFFDENVVAEYSYE
RSVADGVNVGYDVYEIETKVTRKGGALRASEWVDHRDRLTRRKRWGQLDEDTVYTGKELD
RSVVNKSQIRKVIETMKTAVETRIFPTRREVPKTLIFAKTDSHADDIINIVREVYGQGNA
FCKKVTYNADEDPDSILSSFRNDYNPRIAVTVDMIATGTDVKPLEVLLFMRDVRSRNYYE
QMKGRGVRSLGFEDLRRVSQSADSAKIRFVLIDAVGVEKSLKTESRPLERKPTLPLKDLL
QGVALGLRDDDTVLSLANRLVRLSKQLDDKALERVAKTAGGVPLPKLAKGLLEAVDPDQV
LGTAIEKARERGLERTEETLTEAEVLAARNLRVAAACAPFDNPKVREVIEAVRREREQVI
DHINLDEVTFSGYSAQAEAAAKNTIQLFTDYIATHKDEIAALSFFYQQPYQRRRLTFQMI
EELHDVLSRPPLMLTTEKLWSAYARVRQTAVKGSDTRRQMTDLVALVRFALGLENELRPF
ADQVDKRFQEWIFRHNAQRTTAFTPEQTEWLRMMKDHIAASCCIERDDFDYAEFADKGGL
QKAWGLFGEGLDSVMDEMNEELIA
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgacgcctgaagcaaaagcaagggtacagatcgatcgcaaactcgaggatgccggctgg
ataatccaggatttcaggcaggccaacctcggcgccggtgtgggtgtcgtcgtcagggag
tatccgaccgacacaggccccgccgattatctgctctttgtgaaccggcagccggtcggg
gtgatcgaggcgaaaccggacaacaccatcctgaccttcgttgaagagcagaccgaacgg
tacgcgaaaagttccctgaagtggtgcctgaacaccgaacccctcccttttctgtacgag
agcaccggccaggtgagcaggttcaccgaggcgcgcgatccagcgccccgctcgcgcgaa
gtgttccattttcatcgccccgaactcctcgccgagtggatcgagcaacgggagacgctg
cggcgccgcctcgccgagcagatgccggaactccagaccaggaacctgcgtgagtgccag
gtggatgcggtgagaggtctcgagaaatccctggctcaaaacaggccgcgcgcgctggtg
cagatggcgaccggagcgggcaagaccttcaccgcgatcacctccgtttaccgcctgctg
aaatacgccggggcgaggcggatccttttcctggtggatacccgcaaccttgggaagcag
gcgcatcaggaatttcatgcgtacacgccgccggacgacccccgcaagttcaccgaactc
tacaatgtgcaaaggctcaccagcgcgagcctcgatccccatgcccaagtctgtatttcc
acgattcaacgcctgtactcgatgctcagaggagagccgctggacgaatcggcagaggac
atttccttaaacgaactggtgcagaccgaaaagcaggagaagctggtggtgtacaatcca
gcgattccggttgagacattcgacttcatcatcgtcgacgagtgtcaccggtccatctat
aacctatggaagcaggtgctggactatttcgacgctttcctgatcggcctgaccgccacg
ccggacaaacggaccttcgggtttttcgacgagaacgtggttgccgagtattcctatgag
cgctccgtcgccgatggggtcaacgtcgggtacgacgtctatgagatcgagaccaaggtg
acccgcaaggggggtgccctgcgcgccagcgaatgggtggatcaccgtgaccgcctgacg
aggaggaagcgctgggggcagctcgacgaggacacggtttacaccgggaaggagttggac
cgctccgtcgtcaacaagagccagatccgcaaagtgatcgagaccatgaagaccgccgtg
gagacgcggatattcccgacgcgccgggaggtaccgaagacgctgatcttcgccaagacc
gacagccacgccgacgacatcatcaacatcgtccgggaggtgtacggccagggcaacgcg
ttctgcaagaaggtaacctacaacgccgacgaggacccggacagcatcctgtccagcttc
cgcaacgactacaaccctcgcatcgcggtgacggtggacatgatcgctaccgggaccgac
gtgaagccgctggaagtgcttcttttcatgcgggacgtgcgcagcaggaactactacgag
cagatgaaggggcgcggagtgcgcagcctcggtttcgaggacctgcggcgggtaagccaa
tccgccgacagcgcgaagatacgtttcgtgctcatcgacgccgtcggggtggagaaatcg
ctcaaaacagagagccggccgctggagcgcaagccgacgctgccgctgaaggacctgctg
caaggggtggcgctcggactgcgcgacgacgacaccgtgctgagcctcgccaaccgcctg
gtgcggctcagcaagcagctcgatgacaaggcgctggagcgcgtcgccaagacggcgggc
ggcgtgcctttgccgaagctggccaaggggctcctggaggcggtcgacccggaccaggtt
ctcgggaccgccatcgagaaggctcgggaacgggggctcgaacggacggaagagacgctg
actgaggccgaggtgcttgcagcgcgcaacctccgtgtcgccgcggcctgtgcgcctttc
gacaacccgaaggtgcgcgaggttatcgaggcggtgcgccgcgagcgtgaacaggtgata
gatcacatcaaccttgacgaggtcaccttcagcggctacagtgcgcaggccgaagcggcg
gccaaaaacaccatccagcttttcaccgactacatagcgacgcacaaagatgagatagcg
gctctttcctttttctatcagcagccgtaccagcgtcgtcggctcacctttcagatgatt
gaggaactgcacgacgtcctctcgcgtccccccctgatgcttaccacagaaaagctctgg
agcgcctacgcacgtgtgcggcagaccgcggtaaagggtagcgacaccaggcgccagatg
accgatctggtcgcactggtgcggttcgcgctggggttggagaacgaactgcggcccttc
gccgaccaggtggacaagcggttccaggaatggatcttccgccacaacgcccagcgcacc
accgccttcacgccggagcagaccgagtggctgaggatgatgaaggatcacatcgccgcc
agttgctgcatcgagcgggatgatttcgactacgccgagttcgccgataaaggtggactg
cagaaggcatgggggcttttcggggaggggttggactcggtgatggatgagatgaatgag
gagttgattgcgtga

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