Geomonas paludis: M1B72_21315
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Entry
M1B72_21315 CDS
T08160
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gpl
Geomonas paludis
Pathway
gpl00010
Glycolysis / Gluconeogenesis
gpl00020
Citrate cycle (TCA cycle)
gpl00620
Pyruvate metabolism
gpl00650
Butanoate metabolism
gpl00720
Other carbon fixation pathways
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01120
Microbial metabolism in diverse environments
gpl01200
Carbon metabolism
gpl01210
2-Oxocarboxylic acid metabolism
Module
gpl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
M1B72_21315 (nifJ)
00020 Citrate cycle (TCA cycle)
M1B72_21315 (nifJ)
00620 Pyruvate metabolism
M1B72_21315 (nifJ)
00650 Butanoate metabolism
M1B72_21315 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
M1B72_21315 (nifJ)
Enzymes [BR:
gpl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
M1B72_21315 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
TPP_enzyme_C
Fer4_7
Fer4_6
Fer4_10
Fer4
Fer4_2
Fer4_21
Fer4_16
Fer4_8
Fer4_9
Fer4_17
Fer4_15
Fer4_18
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
UPU35950
UniProt:
A0A6V8MQW0
LinkDB
All DBs
Position
complement(5043812..5047363)
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AA seq
1183 aa
AA seq
DB search
MSRRMVTIDGNTAAAHVAHATNEVIAIYPITPSSVMGEISDEKSARGEKNIWGTVPSVSE
LQSEGGASGAVHGALQAGALTTTFTASQGLLLMIPNMFKIAGELTSTVFHISARAISAAA
LNIFGDHSDVMSARSTGWGMICSNNVQEVMDFALISQAATLRARVPFMHYFDGFRTSHEV
QKVEELSFDDMRFMISDELVQAHRERALTPDRPVLRGTAQNPDVYFQGRETVNAYYPKAL
QIVQEEMDKFAGLTGRKYSVAEYVGAPDAERVVIVMGSAADTVQETLETLNAAGEKVGLL
KVRLFRPFPVDAVAACLPATVKKIAVLDRTKEPGSLGEPLYLDVRTAIGEAMADGKTSFK
SYPIIVGGRFGLGSKEFTPGMAKGVLDNLKADKPKNHFVVGIKEDVTNCSLDFDPAFVNP
SAGTYSAMFFGLGSDGTVGANKNSIKIIGENTDNNVQAYFVYDSKKAGTVTVSHLRFGKG
EIRSPYLIDQADFVACHNFSFLEKYDMLSRAKVGGTFLLCSLTDDKEAVWNAMPVEVQQQ
IIDKKLKFYVINAIALGEKLGLGARINVIMQTAFFKISNIMPLDAAIASIKDAIKKSYGK
SGEKVVEMNNKAVDAALENIFEITVPATATSKIRKPAVVGAHAPQFVQEVTAQLIAGRGD
DVPVSMLPADGTFPTATSQYEKRNIAVDIPVWDEQLCIQCGICSFVCPHATIRMKVYDAD
KLAGAPETFKSTDARGNEFKGMKCTIQVAPEDCTGCAACVANCPAKSKEDPKHKAINMKF
QAPLRASEAANYDFFLNIPETDPTLVKLDTLKGSQLVRPLFEYSGACAGCGETPYLKLMS
QLFGDRALIANATGCTSIYGGNLPTTPWAKNADGRGPAWSNSLFEDNAEFGFGMRLAVDK
FNQAALELIDTLSLPADLVAEIKGADQKTQAGVEAQRARVAKLKEILSASGDAAAKKLLS
IADYLVKKSVWIVGGDGWAYDIGYGGLDHVIASGKNVNLLVLDTEVYSNTGGQASKSTPM
GAVAQFAAGGKPQAKKDLAMIAMAYGNVYVAKVSLSNPAQVVKAFMEAEAYDGPSLILAY
SHCIAHGIDMATAVETQKRAVASGHWPLVRYNPDLAEQGKNPLQLDSKDPSISLEEYAYG
ENRYRVLKKNNPEAAATLMARSAELTARRFDLYKRMAEMDFGK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagaatggtaacaatcgacggtaacaccgctgccgcacacgtggcgcacgcc
accaacgaggtgatcgccatctacccgatcaccccctcctcagtcatgggtgagatctcg
gacgagaagagcgcccggggcgagaagaacatctggggcaccgtcccctccgtctccgag
ctgcagtccgaaggtggcgcttccggtgccgtccacggcgcgctccaggccggcgccctg
accaccaccttcaccgccagccagggcctgctgctcatgatcccgaacatgttcaagatc
gcgggcgagctcacctcgaccgtgttccacatctcggcgcgcgccatctcggccgccgcg
ctgaacatcttcggcgaccactccgacgtcatgtcggcccgttccaccggctggggcatg
atctgttccaacaacgtgcaggaggtcatggacttcgcgctgatctcccaggccgccacc
ctgcgtgcccgcgttcccttcatgcactacttcgacggcttcaggacctcccacgaggtg
cagaaggtcgaggagctttcctttgacgacatgcgcttcatgatcagcgacgagctggtc
caggcgcaccgcgagcgcgcgctcactccggaccgcccggtactgcgcggcaccgcccag
aacccggacgtctacttccagggtcgcgagaccgtcaacgcctactatccgaaggcgctg
cagatcgtgcaggaggagatggacaagttcgccgggctcaccggccgcaagtactccgtc
gccgagtacgtcggcgccccggacgccgagcgcgtggtcatcgtgatgggcagcgccgcc
gacaccgtccaggagaccctggagaccctgaacgccgccggcgagaaggtgggcctcttg
aaggtgcgcctgttcaggccgttcccggtcgacgccgtcgccgcctgcctgccggccacc
gtgaagaagatcgccgtgctcgaccgcaccaaggagccgggctccctgggcgagccgctc
tacctcgacgtcaggaccgccatcggcgaggccatggcggacggcaagacctccttcaag
tcctacccgatcatcgtgggcggccgtttcggcctcggttccaaggagttcaccccgggc
atggccaagggcgtgctcgacaacctgaaggccgacaagccgaagaaccacttcgtggtc
ggcatcaaggaagacgtcaccaactgctcgctcgacttcgacccggccttcgtgaacccc
tccgccggcacctactccgccatgttcttcggcctgggctccgacggcaccgtcggcgcc
aacaagaactccatcaagatcatcggcgagaacaccgacaacaacgtccaggcctacttc
gtctacgactccaagaaggccggcaccgtcaccgtgtcccacctgcgcttcggcaagggg
gagatccgctccccgtacctgatcgaccaggcggacttcgtggcctgccacaacttctcc
ttcctggagaagtacgacatgctctcccgcgccaaggtggggggcaccttcctgctctgc
tccctgaccgatgacaaggaagcggtctggaacgccatgccggtcgaggtgcagcagcag
atcatcgacaagaagctcaagttttacgtgatcaacgccattgcgctgggcgagaagctc
ggcctgggcgccaggatcaacgtgatcatgcagaccgccttcttcaagatctccaacatc
atgccgctcgacgcggccatcgcctccatcaaggacgccatcaagaagtcctacggcaag
tccggtgagaaggtggtcgagatgaacaacaaggcggtggacgccgccctggagaacatc
ttcgagatcaccgtgccggcgacggcgaccagcaagatcaggaagcccgccgtcgtgggc
gcccacgccccgcagttcgtgcaggaagtcaccgcgcagctcatcgccggccgcggcgac
gacgtcccggtctccatgctcccggccgacggcaccttcccgaccgcgacctcgcagtac
gagaagcgcaacatcgccgtcgatatcccggtctgggacgagcagctctgcatccagtgc
ggcatctgctccttcgtctgcccgcacgccaccatcaggatgaaggtgtacgacgccgac
aagctggccggcgcaccggagaccttcaagtccaccgacgcccgcggcaacgagttcaag
gggatgaagtgcaccatccaggtcgccccggaagactgcaccggctgcgccgcctgcgtg
gccaactgcccggccaagtccaaggaagaccccaagcacaaggcgatcaacatgaagttc
caggcgccgctcagggcaagcgaggccgccaactacgacttcttcctcaacatcccggag
accgacccgaccctggtcaagctggacaccctcaaggggagccagctggtacgcccgctc
ttcgagtactccggcgcttgcgccggctgcggcgagaccccgtacctgaagctcatgtcc
cagctcttcggcgaccgcgccctgatcgccaacgcgaccggctgcacctcgatctacggc
ggcaacctgccgaccaccccgtgggcgaagaacgccgacggccgcggcccggcctggtcc
aactcgctcttcgaggacaacgccgagttcggcttcggtatgaggctcgcggtggacaag
ttcaaccaggccgccctcgagctgatcgacaccctctccctcccggccgacctggtcgcc
gagatcaagggcgccgaccagaagacccaggccggcgtcgaggcgcagcgtgcccgcgtg
gccaagctgaaggagatcctctccgcttccggcgacgccgcggcgaagaagctcctctcc
atcgccgactacctggtcaagaagtcggtctggatcgtcggcggcgacggctgggcctat
gacatcggctacggcggcctggaccacgtcatcgcctccggcaagaacgtgaacctcctg
gtgctcgacaccgaggtctactccaacaccggcggccaggcctccaagtcgaccccgatg
ggcgccgtggcgcagttcgccgcgggcggcaagccgcaggccaagaaggacctggccatg
atcgccatggcctacggcaacgtctacgtcgccaaggtctccctctccaacccggcccag
gtggtcaaggccttcatggaggccgaggcgtacgacggcccgtccctcatcctggcctac
agccactgcatcgcccacggcatcgacatggccaccgccgtcgagacccagaagcgtgcg
gtcgcctccggccactggccgctggtccgctacaacccggacctcgccgagcagggcaag
aacccgctgcagttggacagcaaggacccgagcatctctctcgaagagtacgcttacggt
gaaaaccgctaccgcgtactgaagaagaacaacccggaagcggccgcgactctcatggcc
cgctccgccgaactcactgcccgccgcttcgatctgtacaagcggatggctgaaatggac
ttcggcaaatag
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