Gimesia panareensis: Pan110_00070
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Entry
Pan110_00070 CDS
T07079
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpn03016
]
Pan110_00070 (truD)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pan110_00070 (truD)
Transfer RNA biogenesis [BR:
gpn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan110_00070 (truD)
Prokaryotic type
Pan110_00070 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
MesX
Motif
Other DBs
NCBI-ProteinID:
QDU47697
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All DBs
Position
complement(6217..7287)
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AA seq
356 aa
AA seq
DB search
MSESEIETLPFLTPDLPGIGGQLKQTPEDFVVEEIPVYEPTGAGEHLFLWIEKRDVSAPY
LVKILSRELQLNPRDIGVAGLKDRFAVTRQYVSVPATCEPLVETFEFTGIQILKATRHEN
KLKTGHLKGNRFSLVVRNTEDDALVKAQAIAKSITQNGFPNYYGAQRMGRDNETFEMGLK
LLRGERVPGKYLRNKALKRLALSAVQSALFNRVLANRLQAGQLFTVQAGDVMQVSASGGL
FVVEYVAAEQLRFDQGETMITGPLFGPKMKQPAQETSAQEQQALSDFGLEPEQFTRYKKL
TAGTRRPLLIRPAALQLESAENGVCFEFTLPSGVYATMLLREFMKTEAAGDMTETS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtccgaaatcgaaacactcccttttctgacgccagacttaccggggatcggc
ggccagctgaaacagacgcccgaagacttcgtggtcgaggaaattcccgtctacgaaccc
acgggcgccggcgaacatctcttcctctggatcgagaaacgggatgtctcagctccctat
ctggtcaaaattctcagccgggaactgcagctcaatccccgcgatatcggcgtcgcggga
ctcaaagaccgctttgccgtcacgcgtcagtatgtgtccgtccccgcgacctgtgaaccg
ctggtcgaaactttcgaattcaccggcatccagattctcaaagcgacccgtcacgagaac
aaactcaaaacgggccacctcaaaggcaaccgcttttcgctcgttgtccggaatacggaa
gacgacgcactcgttaaagcacaagccatcgcaaaatcgatcacacagaatggcttcccg
aattactacggtgctcagcgcatgggacgcgacaacgaaaccttcgagatgggtctcaaa
ctgctcagaggggaacgtgtccccgggaaatatctgcggaacaaggcactcaaacggttg
gccctctcggcggtccagtcggccctgttcaatcgcgtgctcgccaaccgcctccaggcc
ggtcagttgtttacggtgcaggccggcgatgtcatgcaggtctctgcgtccggaggcctg
tttgtcgtcgaatacgtcgctgcggaacaactgcgatttgatcagggagaaacgatgatc
accggtcccctgttcggcccgaaaatgaaacagcctgcccaggaaacatccgcacaggaa
cagcaggcactgagtgactttggactggagccggagcagtttacccgctataagaaactc
accgcggggaccaggcggccgttgctgatccggcccgcagcactccagctggagtcggca
gagaatggggtctgcttcgagttcacgctcccctcgggcgtctatgccaccatgctgctc
agggagttcatgaaaacagaagccgccggggatatgacagagacaagctaa
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