Gimesia panareensis: Pan110_00880
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Entry
Pan110_00880 CDS
T07079
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03420
Nucleotide excision repair
gpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan110_00880 (pcrA_1)
03430 Mismatch repair
Pan110_00880 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_00880 (pcrA_1)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan110_00880 (pcrA_1)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan110_00880 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Pan110_00880 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
PcrA_UvrD_tudor
ResIII
Tudor_1_RapA
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QDU47778
LinkDB
All DBs
Position
complement(98966..101233)
Genome browser
AA seq
755 aa
AA seq
DB search
MDFQQVLTPAQYAAVTHHQGPLLVLAGPGSGKTRVITHRIASLIQSGVSANQILGITFTN
KASDEMSERVQQLIPGMRVEISTFHKFCVKILRRYGRAVGLDSNFSIFDTTDQQQLIRYV
LNELDIDTVAYNPSTIAGMISRAKNDLITAERYAEAFQESIGDHLQAVAARVYPVYQKLL
LESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIVMGLSLNTR
NLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKEILRVADSLIAHNQ
KRKIKTLFTENPEGSAVELLTYNDERQEAEEIALHIRRAVDRGEFEYTDFAIFYRVNSLS
RELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGK
TTQRKLIRWADEKGISLLEAAHQAADCPALSKRAATMVARFAKMISGFSLADSGSVAQLM
ELVIDSTRLIDSWKESPDEEDQQRIANVNELVSTARKYDQIFGDETTLEGFLEVSTLASA
TDQLDAEAGQVTLMTLHAAKGLEYPVVFIIGVEQNLIPHERVLREELRDGLEEERRLFFV
GITRAEQCLYLTQTRERSLRGRPWRTITSDFLKEIDVEVKDMTDFLGEHRSHFDDFVESV
KRGDIDTEALKAAAPQKKPLLMTGADLLKQTPEAADVPQGFSVGMRVRHPRYGVGTVMGI
SGFARKRMVTVLFDDMEEGQTFVAAHCPLQPLGLR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttggattttcagcaggtcctgacaccagcgcaatatgctgccgtcacccatcaccagggt
ccactgctggtgctggcaggcccggggtccggcaagacgcgcgtgattacgcatcggatc
gcttcactgattcagtcaggtgtgtccgccaatcagatcctggggattaccttcaccaac
aaagcgtcggatgaaatgagcgaacgggtgcagcagctgatccccgggatgcgcgtggaa
atttcgacctttcataaattctgtgtcaaaatactgaggcggtatggcagagccgtcggt
ctcgacagtaacttctcaatttttgatacgaccgatcaacagcagctgattcgctacgtg
cttaacgaattagatatcgatacggtggcctacaatccctccacgatcgccggcatgatc
agccgggcgaaaaatgatctgatcacggcagaacgttatgcggaggcgtttcaggaatcg
atcggcgatcacctgcaggcagtcgcggcgcgcgtctatccggtctatcagaaactgctg
ctcgaatcgaacgcggtcgacttcgacgatctgctgctgcatgtcgccagcctgctcaag
ggatctcccgaactgcgggccacgctggatgaacgctatcaatatattctggtggatgag
taccaggataccaacctggcccagtaccagattgtgatgggactctcgctcaatacacgc
aacctctgtgtgaccggcgacccggatcagtcaatctacggctggcgtggtgccaagatt
gaaaacattctgcagttcgaacgggacttccccgactgtaaaacgattcggctcgaacag
aactttcgcagcaccaaagaaattctgcgtgtcgccgacagcctgattgcgcataaccag
aaacggaaaatcaaaacgctgttcaccgaaaacccggaaggctcggcagtcgaactgctg
acttataatgatgagcgacaggaagcagaagagatcgccctgcacatccgccgcgctgtt
gaccggggtgaattcgaatataccgacttcgccatcttttatcgggtgaactccctctcc
cgggaactggagctggcgctggcgcggcataaaattccttatcagctggcgggcagcgtc
gcgttttatgaacggaccgaagtcaaagacctgctctcttacctgaaactgatcaacaac
ccggacgaccgtgttgcattttcccggattgtcaataaacccctgcggggcattggcaaa
acgacacagagaaaactgatccgctgggcggacgaaaaaggaatcagcctgctggaggcg
gcacaccaggcagcggactgccctgctctctcgaaacgagctgcaacgatggtcgcccgt
ttcgccaaaatgatttccggattttctctggctgactccggctctgtggcccagctgatg
gaactggtcatcgacagcacgcgattgatcgacagctggaaagagagccccgacgaagaa
gaccagcagcggatcgccaacgtgaatgagctggtctctactgcgcgaaagtacgatcag
atctttggagatgaaacaacgctcgaaggcttcctggaagtcagtaccttggccagtgcc
accgaccagctggatgcggaagcgggacaggtgacgctgatgacactgcatgccgccaaa
gggctggagtatccggtcgtctttattatcggtgtcgaacagaacctgattccccacgag
cgggtcctccgcgaagaacttcgcgacggactggaagaagagcggcgactgttctttgtg
ggtattacccgggccgaacagtgcctctatctcacccagacgcgggaacgttcgctccgc
ggtcgaccctggcggacaattaccagtgacttccttaaggagattgatgttgaagtcaaa
gacatgaccgattttctgggtgagcatcgctcgcactttgatgatttcgttgaatccgtc
aaacggggtgacatcgataccgaagcactgaaggcggcagctcctcagaagaagcctctg
ctgatgacgggggccgacttgctgaagcagacccccgaagccgcagatgtgccgcagggt
ttctcagtcgggatgcgcgtgcgtcacccccgctatggggtgggcaccgtgatgggtatc
agcggctttgcccgcaaacggatggtgaccgtcctgtttgacgatatggaagaaggacaa
accttcgtcgccgcacattgccccttacaaccgttgggactgcgctaa
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