Gimesia panareensis: Pan110_05920
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Entry
Pan110_05920 CDS
T07079
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein 2B
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gpn
Gimesia panareensis
Pathway
gpn00550
Peptidoglycan biosynthesis
gpn01100
Metabolic pathways
gpn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pan110_05920 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pan110_05920 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpn01011
]
Pan110_05920 (pbpB)
Enzymes [BR:
gpn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pan110_05920 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
gpn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pan110_05920 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Myb_DNA-bind_5
FlaX
Motif
Other DBs
NCBI-ProteinID:
QDU48279
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All DBs
Position
746936..749188
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AA seq
750 aa
AA seq
DB search
MRNRPGNDHMTLENEAGGQSFQVDRLPGVRVFLLGLILVVPLLAVSGRLMFIQMMNAEHF
YSRFGQTTESFESIPSRDGRIVSIDGRVLALDVERFDLQAHYRWLEEPPNPRWLKQQALT
LLEPVERRDQEKVKAAQEQVLARRQQLWEELAQVMRTTPEELQTSCRDVQERVETIIESV
NQRASQKENDSEVTEAESETKTVTKEDQLQQFWSLLKDALTRPPRRPRRERIVVREELDY
HTLASGIPREIALAISAHPERFPGIHIQVATLREYPQKTLAPHEIGIRHRIDEKTLEARK
LRFPEGDPLDYQEGDRIGKMGVERTYDRYLRGLRGLKKVIKNRQGEIIRTEIVREPKSGD
DVVLTLNTSLQDEVQNLLDESLHELRQGTEEQPAEQTDPAAGGCVVVLDVRTGAIVATAA
APRYDLNLLLHPTPEEWQAVLNDPRRPLFPRATQMMLPPGSTFKALTSIALMESGKVDPD
EPYVCRGYLDRPDRHRDYIYRHYGVGHNELTLTRALRESCNVYFFQAARKMGPETIYHWA
DQLGFGKPTGIDIPGERGGHLPDPSPAKPGKKSPWYPGDTLGMAIGQSRLTVTPLQIARL
MAVVANDGELVVPHLAHSIVPSAESATTTRQMISYPRRYVSGIHPGTLERVREGLIEVVA
HSRGTGYKTVRLKEITIAGKTGTAETGGGKNDHAWFAGFVPAQRPKYAFAVVIEHGGSGS
RVAGPVAQKLVRAMLDSSLLQPTQPKLQAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaccgtcctggcaatgatcacatgacgctggaaaacgaggccggtggccagtcg
tttcaggtggatcgtctgcccggcgtacgtgtgtttctgctggggctgattctggtagtc
cccctgctggcggtcagcgggcggctgatgttcattcagatgatgaacgcggaacatttt
tactcccggtttggccagacaacagagtcgtttgaaagtattccgagtcgggacgggcgg
atcgtatccattgatggtcgcgtgctggcgctggatgtggaacgctttgatctgcaggcg
cattatcgctggctggaagaaccgccgaacccgcggtggttgaaacagcaggcgctgacg
ttgctagaaccagtggaacgtcgcgatcaggagaaggtcaaagcggcgcaggaacaggtg
ctggcccgacggcaacagctgtgggaagagctggcgcaggtcatgcggaccacacctgaa
gaattgcagacatcgtgccgggacgtgcaagagcgggtggagacgattatcgagagcgtc
aatcaacgggcctctcagaaggagaacgatagcgaagtcacagaagcggaatcggaaacg
aagaccgtcacaaaagaggaccagctgcagcagttctggtcgctgctgaaagacgcgtta
acgcggccgccccgccgtccgcggcgcgaacgaattgtggtgcgcgaggagctggattat
cacacgctggcgtccgggattccgcgtgagatcgcactggcgatctcggctcatccggag
cggtttccgggaattcatatccaggtggcgacgttgcgcgaatatccgcagaagacgctc
gcaccgcacgagatcgggattcggcatcggatcgatgaaaagacgctggaggcgcgcaag
ctgcggtttccggagggggatccactggattaccaggagggggaccggatcggcaagatg
ggggtcgaacggacctacgaccgttacctgcgcggcttgcgtggcttgaaaaaagtgatc
aagaaccgacagggagaaatcatccggaccgaaatcgttcgcgagccgaaatcgggcgac
gatgtggtactgacgctcaataccagcctgcaggacgaagtacagaatctgctggatgaa
tcgttgcatgagctgcgtcaggggaccgaggagcagccggcggagcagacggatccggca
gccggcggttgtgtggtggtgctggatgtgcgaaccggtgcgatcgtggcgacggcagcg
gcaccgcggtacgatctgaatctgctgctgcatccgactcccgaagagtggcaggcggtt
ctgaacgatccgcgtcgtccactgtttccccgggccacacagatgatgctgccgcccggt
tcgacgttcaaagcgctgacctcgattgcattgatggaaagtggcaaggtcgacccggat
gaaccgtatgtctgccgggggtatctggatcgtcccgatcggcatcgcgactatatttac
cgtcactacggcgtggggcataacgagctgacactgacgcgggcgttgcgggaatcgtgt
aacgtctacttctttcaggcggcccggaagatgggaccggagacgatttatcactgggcc
gatcaactcgggttcggcaagccgacgggcatcgatattccgggggagcggggcggacat
ctgcccgatccctctccagcaaaaccggggaaaaaatcgccctggtatccgggggatacc
ctgggaatggccattggtcagtcgcggctgacggtgacgccgctgcagatcgcgcggctg
atggcggtggtggcgaatgacggagagctggtggtgccccacctggcacatagtatcgtg
ccctctgctgaatcagccactacgacgcggcagatgatttcgtatccgcggcggtacgtg
agcggcattcatccggggacgctggaacgggtgcgggaaggattgatcgaggtggtcgcg
cattcacgggggaccggatataaaacggtccgtctcaaggaaatcacgattgccggtaaa
acggggaccgcagaaaccggaggcgggaagaacgaccatgcctggttcgcgggattcgtc
cccgcgcagcgaccgaagtatgcgtttgccgtagtgatcgagcatgggggctccgggagc
cgcgtggcggggccagtggcgcagaagctggtgcgggcgatgctcgattccagcctgctg
cagccaacccaaccgaagttgcaggcaaactga
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