Gimesia panareensis: Pan110_12500
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Entry
Pan110_12500 CDS
T07079
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpn03019
]
Pan110_12500 (yhaM_1)
Messenger RNA biogenesis [BR:
gpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan110_12500 (yhaM_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Matrilin_ccoil
TraI_2
Cas3_HD
RMI2
HD-CE
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDU48934
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All DBs
Position
1609986..1610957
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AA seq
323 aa
AA seq
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MSRQNINQLKDGDTVNEVFLLVDKQLRANRNASLFLSADLRDSTGVVNARMWNVVEERMQ
HFQSGNYVQVKGKVHLFQGALQIILTYIEPVSAENLDPAEFQPQASHDVQALLAKLREML
LGIENNEVRTLMECFLVDEALMDEFCRAPAGVKTHHAYHGGLIEHVVNLMETAHRIADLY
PKADMSLLLAGVFLHDIGKVRELGYENEFIYTDEGQLLGHLIIGVEMLTEKIQAYQEMTG
ESFPKEAELRLKHMIVSHHGTYEFGSPRLPMTPEAVALHHLDNLDAKVNEFARFIDDDLN
STSSWTPYSPRLQRKLFKGMTED
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacaaaatataaatcaactcaaggatggtgatactgtaaacgaggtttttctg
ttagttgacaagcagttacgagcgaatcggaatgcgagtctgtttctgtctgctgacctg
agagactcaaccggagtcgtcaacgcacggatgtggaatgttgtagaagaacggatgcag
cattttcagtccggcaattacgttcaggtcaaagggaaggtgcacctgtttcagggagcc
ctgcaaatcattctgacctacatcgaaccggtttctgcagagaacctggacccggctgag
tttcagccccaggcctcacatgatgtgcaggcgttgctggccaagctgcgtgagatgctg
ctgggaattgaaaataacgaagttcgtacgctcatggagtgttttctcgtggatgaggcc
ctgatggatgagttctgtcgggcacccgccggggtgaagacgcaccacgcctatcacggc
ggcctgatcgagcatgtcgtgaatctgatggagacggcacatcggatcgcggacctgtat
cccaaagcggatatgagcctgctgctggcaggggttttcctgcatgacatcggcaaagtg
cgcgagctgggttacgagaatgaattcatctataccgacgaaggtcagctgctggggcac
ctgattatcggtgtggagatgctgaccgagaagatccaggcttatcaggaaatgacgggg
gaatcattcccgaaagaggcggaactgcggttgaagcatatgattgtgagccatcacggc
acttacgagttcggcagcccccgtctgccgatgacgccggaagcggtcgccctgcatcat
ctggataacctggatgcgaaagtcaatgaatttgcgcggttcattgacgatgatctgaat
tcgacatccagctggactccctattcacctcgcttgcagcgaaaactgtttaagggaatg
actgaggactga
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