Gimesia panareensis: Pan110_19910
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Entry
Pan110_19910 CDS
T07079
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_19910 (addB)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan110_19910 (addB)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pan110_19910 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
UvrD_C
AAA_22
Inj_translocase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDU49652
LinkDB
All DBs
Position
2697465..2700839
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AA seq
1124 aa
AA seq
DB search
MQPEVQILTGTAGSGKTDHLLDEYRRALQSGLERQCPGKTLWLSPTIRSRRQVLDRLPGP
DLPICFAPNVYTFEAFAETILKSLDEPIQTLPELSKRYLLRSIVDDLISAGQISYFGSIA
GSSGFLDLISSFISELKREEIWPEDFSRACGQIGSDSQQKDQELSLIYRRYQVALHEMRR
YDSEGRFWSARTALQDGMWGPLSEFDLIVLDGFADFTHTQYEILELLAARTKKLCISLPL
EQETRRGDLFAKSLVARQILETRLPGRVSTVYFDQASSNTARSQISQQLFANPREIVPSP
EAGQLKVIAVAGQRNELEVLAGEIKRLLREGVLPEDITLAFRSTLEYGDLIDETLTAAGI
PCFLGQEQTFSRFSVVRAIFAFLQLEIENWSFDSLMSVLDSSYFTPHWPEYQGGQAVRSL
SRVLRQLKIDSGKADILHALENESHKAAEISARYPDRLDRKAAAQELRSAFQLAQRLFTE
TKRLSGRELFVTWIEILISLANEFGLPGTWADADPDTDPLAKRDRQVWERFQQLLFHAVA
EVERIEAFHQKQAPPLDLAGFRSLLLDLLEQQTISLQPEEAGRVKVLDASQLRNLNIPYL
LVGGLSEASFPRGHREDCLYGEKDRGALNQQGLTLKLHANQQQEEMLLFYEVMTRFSQQL
ILSYPAISATGQPLFPSPYLTTLIDLFEPQALHVKQAGELNPLPRPEQTLSRRDLRILAI
DQLKQGRPGLFLNVFQDEDLQATVRNILAATEMAVARFEQPGFTEYEGMLTSPASQRAIR
ERFPREYEFSTTQLELYLACPYQFFAQSVLGIEVPEPPELRTNYLKRGIHVHSILTRLIE
LLQEQGDRDQLYAAAQVESLFHELLEQRIADDFVGTRLQQVLTKIEKQILEDWGSLFAEQ
SETYARQFDELWDRVPAVVGREVPFGEVPGEPDSSQQQYQYLTLGEGVQETRIRGQIDRI
DLGSINGQKYFNIIDYKTGRSVPSAKEIRTGKKLQLALYLIAARRLEMIDADAEPFHLGY
WKIQETGFVMPLHSYRKKQIEPLSGEDLELLESTLEVLVPHLADLIRQGVFPVQVDQGVS
HLDPAFLSVCRISQVESYRESLGKEIDLLHVPGPDAESESTEEA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccgaagttcaaatcctgacaggaaccgcgggttccggtaaaacagaccatttg
ctggatgagtaccggcgtgcactgcagtcgggactggaacgccaatgcccgggaaagacg
ctctggctgtctcccacgatccgttccaggcgacaggtgctggatcgcctgcccgggccg
gatctaccgatctgcttcgcccccaatgtttatacgtttgaggcctttgcagagacgatc
ctcaagtcattggatgaaccgatccagactctgccggaactctccaaacggtacctgctg
cggagtattgtcgatgatttgatttctgcgggacagatcagctatttcggatccattgcg
ggatcttccgggtttctggatctgatctccagcttcatctcggaactgaaacgggaagaa
atctggccggaagatttttcccgagcctgcggacaaatcggttccgactcccagcagaag
gaccaggagctttccctgatttaccgtcgctaccaggtcgccctgcacgagatgcggcgc
tacgattcggaaggtcgtttctggtcagcccgcacggcactgcaggatggaatgtggggg
cctttgagcgaatttgatctgatcgttctggatggctttgctgatttcacacacacgcag
tacgagattctggaactgctggcagcgcggactaaaaagctttgtatttcgctaccgctc
gaacaggaaacacgacgcggtgatctgttcgcaaaatcattggttgcccgacagattctg
gaaacgcgtctgcccggtcgtgtttccactgtctattttgatcaggcgtcatcgaacacc
gcacgcagccagatcagccagcagctgtttgcaaatccgcgcgaaattgttccctcgcca
gaagcaggtcagcttaaagtaattgcagttgccggtcagcgtaatgagctggaagtcctc
gcgggagaaatcaaacggctgttacgcgaaggcgttttacccgaggacatcacccttgca
ttccgctcgacactggagtatggagatctgattgatgaaaccctgactgcagccgggatt
ccctgttttctgggacaggagcagacattttcccgtttctccgtggtgcgtgcgattttt
gccttcctgcaactcgaaattgaaaactggtcctttgacagcctgatgtcggtgctggat
tccagttactttacgccccactggcccgagtatcagggcggtcaggcggttcgctcgttg
tcgcgtgtcttaagacagctcaaaattgattccggcaaagcagacatcctgcatgcgctc
gaaaacgagagtcacaaagcggccgagatcagcgcccgctatccagaccgcctggatcga
aaagcggcggcacaggaactgagatctgcgtttcagctggcgcagcgactgttcaccgag
acaaaacggctgtcgggcagggaactgtttgtgacctggattgaaatcctgatttcgctg
gcgaacgaatttggattaccgggaacctgggctgatgcggatccggatacggacccgctg
gcgaaacgggacaggcaggtctgggaacggtttcaacagctgctgtttcatgccgtggcg
gaagtcgaacgaattgaagcgttccaccagaaacaggccccgcctctggatctggccggt
tttcgcagcctgctgctggatctgctcgaacagcagacaatttctctgcaaccggaggaa
gccgggcgtgtcaaagtgctggatgcctctcagctgagaaacctgaatatcccttatcta
ctggtgggaggcttgagcgaagccagcttcccccgtggacatcgcgaagactgcctgtat
ggagaaaaggaccggggggcactcaaccagcaggggctcactctgaagctgcacgccaat
caacagcaggaagaaatgttgttgttttatgaggtcatgacgcggttctcacaacagttg
atcctgagctatcccgcaatcagcgctaccggccagccgctgtttcccagcccgtatctg
acgacgctgattgatctatttgaaccgcaggccctgcatgtcaagcaggcgggcgagctg
aatccgctccctcgtccggaacagactctgtcccgccgcgatttacggatcctggccatc
gatcaacttaaacagggccgaccgggactgtttctgaatgtctttcaggacgaggatctg
caagcgaccgtgcggaacattctggcggcgacagaaatggcggtagcccgctttgaacag
cccgggtttaccgaatatgaaggcatgctgacttcgcccgccagtcaacgggccatccgg
gagcggttcccccgggaatatgaattcagtaccacacaactggaactgtacctggcctgc
ccctatcagttctttgctcagagcgttctgggaatcgaagtccccgaacctcccgaactg
cggacgaactatcttaaacgcgggattcatgttcacagcatcctgaccagactgatagag
ctgttgcaggaacagggggaccgtgaccagttatatgcagctgcacaggtcgaaagcctg
tttcacgaacttctggagcagcggatcgccgatgattttgtggggaccaggttgcagcag
gttcttacgaaaattgagaagcagattctggaagactggggcagcctgtttgccgagcag
tcagaaacctatgcccgtcagtttgatgaactctgggatcgggtgcccgcggtggttggc
agggaggttccgtttggcgaagttcctggcgaacctgattccagtcaacagcaataccag
tatcttacactcggcgaaggcgtgcaggagacccgtattcgtggtcagattgaccggatc
gatctgggcagtatcaacggccagaaatatttcaacattattgactataaaacagggcgt
tccgtgccctccgcaaaggaaatccgtaccgggaaaaagctgcagctggcgctgtatctt
attgcggcgcgtcggctggaaatgatcgatgccgacgctgaaccgttccacctgggatac
tggaaaatccaggagaccggctttgtgatgcccctgcattcgtatcgcaaaaaacagatt
gaacccctgtctggtgaagatctggagctgctggaatcgacactggaagtactggttccg
catctggcagatttaattcgtcagggagtgtttcctgtccaggtcgatcagggagtatca
catctcgatccggcattcctgtcggtctgccggatttcgcaagtggaaagttatcgcgag
agcctggggaaagaaatcgatctgctccatgttcccgggccggatgccgaatcagaatca
acagaggaagcttag
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