Gimesia panareensis: Pan110_22650
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Entry
Pan110_22650 CDS
T07079
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
gpn
Gimesia panareensis
Pathway
gpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan110_22650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpn03021
]
Pan110_22650
03019 Messenger RNA biogenesis [BR:
gpn03019
]
Pan110_22650
Transcription machinery [BR:
gpn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Pan110_22650
Messenger RNA biogenesis [BR:
gpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pan110_22650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QDU49924
UniProt:
A0A518A5D9
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All DBs
Position
complement(3030248..3031855)
Genome browser
AA seq
535 aa
AA seq
DB search
MAAKSSETSDKPKSTRRKTTKTRKKAEKPAEDTFEQSETESLQDEYHRKAEDNLELFENS
HSSTEAETEREHENMSDFPADSIDDEQSSNQTDNDRSGDKSGGNRRRRRRRRKSDNPSPQ
GRQGQGGNNRGRSGGNRGNRSRSGNNRSQQRRSRSTSSSSAASENITGTIEGVLELHPKD
YGFIRDPKVNYKAQDSDAFVSSSLIEKHNLRAGILIKGEVGPGTRGQGPRLKSIESIDGR
TVEEYMEIKSFDELTPINPFEQIKLETGPMPITMRVMDLLTPIGKGQRALVVAPPRTGKT
MLLQDIAEAVSKNHPEIRLMVLLIDERPEEVTEMQRSIKGEVISSSMDRDVESHVRTSQL
IFERGKRLAEAGEDAFILLDSITRTARAFNKWVGNTGRTMSGGLDVKAMDIPKKMFGTAR
RFDEGGSLTVLGTALIDTGSRMDEVIFQEFKGTGNMEMVLSRELSDRRIFPAIDITLSGT
RREEKILEPEVLEGVTMLRRSLISLNPVEAMEQLSSTLKKFPTNKEFLEKIRAIL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaagagttctgaaacttcagacaaaccaaaatctacccgtcgaaaaactacc
aagacacgcaaaaaagcggaaaaacctgccgaggacacttttgaacaaagtgagactgaa
tcactgcaagatgaataccatcgcaaagcagaagacaacctcgaacttttcgaaaactct
cactcttccactgaagcagaaactgaaagagaacatgaaaacatgtcggatttccctgct
gattccatagacgacgaacaaagctccaaccagacagacaatgaccgctccggagacaaa
tccggagggaatcgccgccgtcgaagacgacgaagaaaatcagacaaccccagcccccag
ggacgacaggggcagggtggcaacaaccgtggccgctccggaggaaaccgggggaaccgt
tcccgctctggtaataacaggtcgcaacagcggcgcagtcgctccacttcatcttcatcg
gctgccagtgagaacatcaccggcaccattgaaggagttctggaactgcatcccaaggat
tatggtttcatccgagatcccaaggtcaactacaaggcacaggattctgacgctttcgtt
tccagttcattgatcgagaaacacaatctgcgagcaggaatcctcatcaaaggcgaagtc
ggtcccggcaccagaggtcaggggccccgcctgaaaagtattgaatcgattgatggtcgt
accgtcgaagagtacatggaaatcaaatccttcgatgaactgacccccattaaccccttc
gagcagatcaaactggaaacgggtccgatgccgattacaatgcgggtgatggatcttctg
actcccatcggcaaaggtcagcgcgcactggttgtcgcacctccacgaaccggtaaaacc
atgctgctgcaggatatcgctgaggcagtcagtaagaatcatccggaaatccggctcatg
gtcctgctcatcgacgaacggcctgaagaagtcactgaaatgcaacgctcgatcaagggc
gaagtcatttcttcatccatggaccgggatgtcgagagtcatgtacgaaccagtcagctc
atcttcgagcgtggcaagcgtctggcggaagctggcgaagatgcttttatcctgctggac
agtattacccggacagcacgggccttcaacaaatgggttggtaacaccggtcgcaccatg
agtggtggtctggatgtcaaagcgatggacattcccaagaaaatgtttggtaccgcccgc
cgcttcgacgaaggtggttcactgaccgttctgggtaccgccctgatcgataccggaagc
cggatggatgaagtcattttccaggaattcaagggaaccggtaacatggaaatggtcctc
agccgggaactttccgaccgccgtattttccccgcgattgacatcaccctttccgggacg
cgtcgtgaagaaaagattcttgaaccggaagtgctcgaaggtgtgactatgcttcgcaga
agcctgatctcattaaaccctgtggaagccatggagcagttgagcagtacgctcaagaag
ttccccacgaacaaggagtttctggaaaagatccgggcgatcctctaa
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