Gimesia panareensis: Pan110_24570
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Entry
Pan110_24570 CDS
T07079
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03420
Nucleotide excision repair
gpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan110_24570 (pcrA_2)
03430 Mismatch repair
Pan110_24570 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_24570 (pcrA_2)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan110_24570 (pcrA_2)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan110_24570 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Pan110_24570 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_16
DO-GTPase2
DEAD
PMC2NT
DUF488-N3i
FUSC
Motif
Other DBs
NCBI-ProteinID:
QDU50115
LinkDB
All DBs
Position
complement(3300223..3302202)
Genome browser
AA seq
659 aa
AA seq
DB search
MSLSPTSHSSSHLSALNPAQREAASTISGPLLVLAGAGTGKTRVITYRMVELIRQGVPPD
KILSVTFTNKAAKEMQERMSALLGKRLPAKPFISTFHSLCVRILREEITALGYPQKFVIY
DRGDQESAARAALREIRVNDKSLRPGDLLNRISNWKMANVSPEMATNYTENDFDFLAAMA
YRKYQTKLRSSGAVDFDDLLMLTNDLFDQFPEVLAKVQSKFDFVQIDEYQDTNLSQFNLI
RALVKPHLNLCVVGDDDQSIYGWRGAEVRHILGFQQQFPGAKVVRLESNYRCTDKIIDLA
NRLVQHNRDRHKKQLVAHKKMGAPVRFLELADELTEAEKIIGEIRYLHETQDIPLRDFAI
LFRTNEQPRVFETELRRTNVRYQLIGSQSFFDRREIRDLLAYLKTLAFPHDELSMLRIIN
TPTRGIGSGTVEKLVNQAVKAGHHFWDMVDSAREANELTPRASTALNSFHQLIRRYRARL
EQHPRELARIMQDLIQEIDYASEIRKQYKTSEQQQARLVVLEQFIESINEYCQRSSDPSP
IGFLEETALGDRDDLNEKEDQLAQDAVKLMTLHSAKGLEFPRVYLVGMEEGLLPHKRSVE
GTDAEIAEERRIAYVGITRAQDYLTLSRAATRTKWGKKQPTLPSRFLFEMRSTGEEDDE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtctccgacctcccattcttccagtcatctctccgccctcaatcccgcacag
cgtgaagcagcctctaccatttccggaccgctgctggtcctggcaggcgccggcaccggt
aaaacccgcgtgatcacctatcgcatggtcgaactgatccgacagggggtcccccccgac
aaaatcctttcggtcaccttcaccaacaaggcagcgaaggaaatgcaggagcggatgagc
gcactgctggggaaacgcctgcctgccaaaccctttatttccacattccactcgctctgt
gtccggatcctccgcgaagaaatcactgcactgggctatccgcagaagttcgtcatttac
gatcgtggcgatcaggaatccgcggcccgggcagccctccgcgaaatccgcgtcaacgac
aaaagcctgcgtcccggagatctgctgaatcggatcagtaactggaaaatggccaacgtc
tctccggagatggccaccaactacaccgaaaacgattttgacttcctggccgccatggct
tatcgcaagtatcagaccaaactgcgttccagtggcgccgtcgactttgacgacctgctg
atgctgaccaacgatctctttgatcagtttcccgaagtcctcgccaaggtccagagtaag
ttcgactttgtgcagatcgacgaataccaggatacgaacctctcgcagttcaacctgatc
cgcgccctggtcaagccccatctgaacctctgcgttgtaggggatgacgaccagtccatt
tacggctggcgcggggcggaagtccgccacattctgggattccagcagcagtttcccggc
gccaaagtcgtccgcctggaaagcaactaccgctgtaccgacaaaattatcgacctggcc
aatcgcctcgtccagcacaaccgggatcgacataagaaacagctcgtcgcccataaaaaa
atgggcgctccggtccgcttcctcgaactggctgatgaattgaccgaggcggaaaaaatc
attggcgaaattcgctacctgcacgagacacaggatattcccctgcgagattttgccatc
ctgttccgcaccaacgaacagccccgcgttttcgaaacggaactccgccgaaccaacgtc
cgctatcagctgatcggcagccagtcttttttcgatcgtcgcgaaatccgcgacctgctg
gcctatctgaaaacgctggcctttccacacgatgaactctccatgctgcggatcatcaat
acgcccacccggggcattggcagcggtacggtcgaaaaactggtcaaccaggccgtcaaa
gccggccatcacttctgggacatggtcgattccgcgcgcgaagccaatgagttgacgccg
cgtgccagcaccgccctgaacagttttcaccagctgattcgtcgctaccgggcacgcctt
gaacagcatccccgggaactggcccggatcatgcaggatctgattcaggaaattgattac
gcctcggaaatcagaaaacagtataagacctccgagcagcagcaggcccgactggtcgtc
ctggaacagttcattgaatcgatcaatgaatactgccagagaagcagcgatccgagcccg
attggttttctggaagaaacggccctgggagaccgtgacgatctgaatgaaaaggaagat
cagctcgctcaggatgccgtaaaactgatgaccctgcacagcgccaagggactcgaattc
ccccgcgtctacctggtcggcatggaagagggccttctgccgcacaaacggtcggtcgag
gggacggacgcggaaattgcggaagagcgacgcatcgcctacgtcggcattacccgggcc
caggattacctgacgctcagccgcgccgccacccggaccaagtggggcaaaaaacagccg
accctgccatcccgctttctgtttgaaatgcggagtaccggtgaggaggacgacgagtga
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