Gimesia panareensis: Pan110_25300
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Entry
Pan110_25300 CDS
T07079
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan110_25300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpn03019
]
Pan110_25300 (recQ)
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_25300 (recQ)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan110_25300 (recQ)
Messenger RNA biogenesis [BR:
gpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan110_25300 (recQ)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pan110_25300 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDU50187
LinkDB
All DBs
Position
complement(3391989..3393824)
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AA seq
611 aa
AA seq
DB search
MAETGMDDALLDVLHEYWGYSEFRPLQQAAMTSVLEGRDSLVVLPTGGGKSLCYQAPALC
MEGTAVVVSPLISLMKDQVDALRVCGISAACLNSSLDQEEARQVFRDLRAGKIKLLYVAP
ERLMLEGMLSMLAEIRLAYIVIDEAHCVSMWGHDFRPHYRELQELKNIFPQCGIHAYTAT
ATEQVRSDIATQLGLQDLELLIGSFDRPNLTYSVSRRADRFSQVCDVIDRHPEESGVIYC
ISRADVESLSESLNNAGYETRPYHAGLPDEERAANQEAFIQDQIDVIVATIAFGMGIDKP
NVRYVIHAGLPKSLENYQQESGRAGRDGLEAECVLLYSEQDAMIWQRILEDQPDESKASS
FESLQAMQNYCHAFDCRHRYLMRHFGQDLEQDCDTACDLCRGDFQQVDDALVIGQKILSS
VYRQDQNYGASYTAAVLKGSKDKKVLTNGHDQLSTYGLLKGESLTTIRSWLNQLVTQGFL
TKTAEYQQLRITKTGWQLLKGEATPQLMQTTQENKAEKSRRTKEKYDSLNWKGVDKGLFE
VLRDLRKQIASEKGIQPYMVFGDATLRELARHKPSTQPQFLEIWGVGQKKCDDFGQQFLQ
SIADYQGESQE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacagggatggacgacgcgctgctggatgtcttacacgaatactgggggtac
tccgaattccggcccctgcagcaggcagcgatgacctcagtcctggagggccgcgactcg
ctggtcgtactcccgaccggtgggggaaagtcgctctgctatcaggcgcccgccctctgc
atggaagggaccgcggtcgttgtcagccccctgatttctctgatgaaagaccaggtcgac
gccctgcgggtctgtggcatctcagccgcctgcctcaacagctcactggatcaggaagaa
gcccgccaggtcttccgcgatctccgggcagggaaaatcaaactgctgtatgttgcccct
gaacgactcatgcttgagggcatgctcagcatgctcgcggaaatcaggctggcttatatc
gtcatcgacgaagcacactgcgtcagcatgtggggccacgatttccgcccccactaccgg
gaactgcaggagttgaaaaacatcttcccccagtgcggcattcacgcttataccgcgacc
gccaccgagcaggtccgctccgatatcgccacgcaactcggtctgcaggatctggaactg
ctcatcggttcgttcgatcgtcctaacctgacttactccgtctcccgccgcgccgatcga
ttttcccaagtctgtgacgtcatcgatcggcacccggaagaatcgggagtcatttactgt
atctcccgagccgacgtggaatcactgagcgaatcgctcaacaatgccggctatgaaacg
cgtccctatcacgcgggtctgcccgatgaggagcgggccgcgaaccaggaagcctttatc
caggatcagatcgatgtcatcgtcgccacgatcgcctttggcatgggcatcgataaaccc
aatgtccgctatgtcattcacgccggactgcccaagtcgctggaaaattatcagcaggag
agcggccgggcagggcgggacggactcgaagccgaatgcgtgctgctctactccgaacag
gatgcgatgatctggcagcgtatcctcgaagatcagccggacgaatccaaagcgagctcc
tttgaatcactacaggcgatgcagaattactgtcacgccttcgactgtcggcaccgctat
ctgatgcggcacttcggccaggatctggagcaggactgcgacacagcctgcgatctctgc
cggggcgatttccagcaggttgacgatgccctggtcatcgggcagaaaattctctcctcg
gtctatcgccaggatcagaattatggagcttcctataccgcagccgtgctgaaaggttcg
aaagacaaaaaagtcctcaccaacgggcacgaccagttgagtacctatggtctcctgaaa
ggggagagcttgactaccatccgcagctggctcaaccagctggtgacccagggctttctg
accaaaactgccgaataccagcagttgcgaatcaccaaaaccggctggcagttactcaaa
ggggaagccactccgcaactgatgcagaccacccaggaaaacaaagcggagaaatcccgt
cgtacgaaagaaaagtatgacagcctcaactggaagggggtcgacaagggactctttgaa
gtgctccgcgatctccgcaaacagattgccagcgaaaaagggattcaaccctatatggtt
ttcggcgatgccacactgcgggaactggcccgccacaagccctccacacagccacaattc
cttgaaatctggggcgtgggccagaaaaaatgcgatgattttggacagcagtttctgcaa
tcaatcgctgactaccagggcgaatcgcaggaataa
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