Gimesia panareensis: Pan110_26080
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Entry
Pan110_26080 CDS
T07079
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03030
DNA replication
gpn03430
Mismatch repair
gpn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan110_26080 (dnaX_1)
03430 Mismatch repair
Pan110_26080 (dnaX_1)
03440 Homologous recombination
Pan110_26080 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpn03032
]
Pan110_26080 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_26080 (dnaX_1)
Enzymes [BR:
gpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan110_26080 (dnaX_1)
DNA replication proteins [BR:
gpn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan110_26080 (dnaX_1)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan110_26080 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_5
AAA_14
Mg_chelatase
AAA_30
AAA_18
AAA_16
AAA_2
RCF1-5-like_lid
AAA_19
AAA_28
PIF1
nSTAND3
Glyco_tranf_2_5
DUF815
RHH_5
DEAD
TsaE
Motif
Other DBs
NCBI-ProteinID:
QDU50264
LinkDB
All DBs
Position
3485813..3487606
Genome browser
AA seq
597 aa
AA seq
DB search
MSKQSLQYTVLARRFRPQNFSEVVGQEMVAKALQNAIRGDRVAHAYLFTGARGVGKTSMA
RILAKALNCPNTQDGIPCGECEICQNISTGSDVDVLEIDGASNRGIDDIRSLRANVNVRS
MRSKYKIYIIDEVHMLTKEAFNALLKTLEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDF
GYIEETSICARLKQIAEAEGVSVSDEAIQLVARRAGGSMRDSQSIFDQLLSFGEAELTAE
GVHRILGTASDERLIGLLDALMQRQRDVALSLFDAALTSGVQLNELVDQLLNYLRDLSVV
ASGANEVTLLAISENNRASLQRQAENWGIHTCLAAFQILNEARNKMFRASHGRALVELAL
IRISLLEDLDQLCAFMKSGGAVPAMAAPSRPAVSAAPVAPPTPSRPPETASRSVPEPAVD
QKKIEKKNENQSIVASNSIESPTPEQEIIPFRAGMESLLLSQLIENTGDLLKDSLKGVAS
IAISGPKQLDLQFSKSYNFAKQYCERPEMLARLEAALEKLTGIRGKIRLIVQESVSAEED
ADENNNRSPQAQKKRVEKRDLAPDSDEFLQEALTVFNAQSVRVDVLKVKTEEKKEDS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaatcgctacagtacacggtgctggcccgtcgttttcgtccgcagaacttc
tcggaagtggtggggcaggaaatggtggccaaggcactgcagaatgccattcggggggac
cgggtggcacacgcttacctgtttaccggtgcccggggtgtgggaaaaacgtcgatggcc
cggattctggccaaggcgttgaactgccccaacacgcaggacgggattccctgcggcgaa
tgcgaaatctgccagaatatttcgacgggcagcgatgtcgatgtgctggagatcgatggt
gcatccaatcgcgggatcgatgatatccgctccctgcgggcgaatgtgaatgtgcgttcg
atgcgatcgaaatacaagatctatatcatcgacgaagtccacatgctgaccaaggaggcc
ttcaatgccctgctgaaaacgctggaagaaccgcctccgaacgtcaaattcatcttctgt
acgaccgagcccaacaagctgcccgatacgattctctcccgctgtcagcggtttgacttt
ggttatattgaagaaacgagtatctgtgctcggctgaaacagatcgcggaagcggaagga
gtttctgtttctgatgaggcgattcagctggtggcccgtcgcgccggcggttcgatgcgg
gacagccagtctattttcgaccagttgctttctttcggtgaagcggaactgactgccgag
ggcgtgcaccggattctgggaaccgccagtgatgagcggctgatcggactgctggatgcg
ttaatgcagcggcagcgggatgtggccctgtctttgtttgacgcggcactgacgtctggc
gtgcagttaaatgaactggtcgatcagttgctgaattatctgcgggatctgtctgtcgtc
gccagcggggcgaatgaagtcaccctgctggcgatctcggaaaacaatcgggccagtctg
cagcgacaggctgaaaactggggcattcacacttgcctggcggcatttcagatcctgaat
gaggcgcggaataagatgtttcgggccagccacggtcgtgccctggtggagctggcactg
attcggatttctctgctggaagatctcgaccagttgtgtgccttcatgaaatcaggtggt
gctgtccccgctatggcagcgccctcccgccctgccgtctcagcagctcccgtggcccct
ccaacaccatcccggccgccggaaacagcttctcgatcggttccagaaccagctgtcgat
caaaaaaaaattgaaaaaaaaaatgaaaatcaatcgattgtagcgtcaaattcaattgag
agccccactcctgaacaggaaatcattccttttcgggcagggatggaaagtttgttgttg
tcgcaactaattgaaaatacaggggatctgttgaaagattcccttaagggagtggcgtca
atagcaatttctgggccgaaacagctggatttacaattctctaagagctataattttgcc
aaacagtactgcgaacggccggaaatgctggcccgtctcgaagcggcactggagaaactg
acgggaatacgaggcaaaattcgcctgatcgtccaggaatccgtgagtgcagaagaggac
gcagatgaaaataacaatcgatccccacaggcacagaagaaacgggtggagaagcgtgat
ttagcgcctgattcagacgagttcctgcaggaagccttgacggttttcaatgcccagagc
gtgcgagtggatgttttaaaagtcaaaacggaagagaaaaaagaggattcatag
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