Gimesia panareensis: Pan110_28040
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Entry
Pan110_28040 CDS
T07079
Symbol
omcB_1
Name
(GenBank) Large cysteine-rich periplasmic protein OmcB precursor
Organism
gpn
Gimesia panareensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
CARDB
NPCBM_assoc
TRAP_beta
DUF7507
DUF7619
Chlam_OMP6
CtaG_Cox11
Motif
Other DBs
NCBI-ProteinID:
QDU50453
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Position
complement(3712471..3715248)
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AA seq
925 aa
AA seq
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MSNVAIKLVAVTGVIGLGVLMFLQAQKGIQSTSNQNGVDQYVALEGDNASVTEATPESGT
IPSDQVPAELSELAAKNAHPLKAEETKQPELPFAPNRKSQQQKIKLTSGSEDAVFEAQQE
PPSEFEPDNQAELVPAGKGLDFRESPKTAAPALSDENPFTRTPQPEPAAPAEKKATETVA
EPAFDAGPQFGPAMAAPATADSKGPKTEVPPRETLVTELDSSNPFESQSSETKPAKTPAP
ASAKPEPEPFNLGPEPEPAAKENPFPEESSPAAKLETGEPPFELKPEPVPETPAVDANPF
MTTPEELKAAPQPAAPAAIPATPKVEPEFNPFSDEPQMKAPELKSAKEENTPSEFEIQPK
KEPAPAEPTFSINPAPTTPVETPEQPVTPASKEQSDPDVVVIKKRQPEDNPREPSLFAPE
GKTADKLEPAAPQPIEIAPSAEPKPLNLVEGSQPEPGEPAQLNIQQKVQSPKMTIQKIAP
PEAVLGQPFIYHVLVKNSGTTSAREVVVEDRIPSGAKLTGTIPRAEQINDRIIWRLGAMG
PGEEKKISIRVIPEKPGQIGSVATVNFVTEVASETKITSPQLSIKSDQPSAVKPGEVTVV
NYTITNTGSGDAKNVYVRSIIPPQFSHPGGDDLEYHVGVIPAGETREVQLQLKAIKPGAG
KNVSSVVGDGNLKAETTVPLKVIGNSEEFLITRKGPKNRYLGRAGVYENTIANNTEQAIK
NISIFESVPPGMKFISASGKGQFDTVRRVVQWDIAELAGGMQQVFSVELEPTEVGKKVST
VQVVTGNNSKFSANLQSEVNIIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANN
VEFRVKIPQEMVFVAAKGPARYKQAGSFVIFESAQVLAPQQSLDFELTLAARNKGDARVL
VTVQSQQMEKPLNQEEAIPILDKLQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtagcgatcaaactcgtcgccgtgaccggagtcattggtctcggcgtactg
atgtttcttcaggctcaaaaaggcattcaatcgaccagcaaccagaatggggtcgatcag
tatgttgctctggaaggcgataatgcctctgtcacagaagcgacaccagagtccggaacg
atcccttccgatcaggttccggctgaactctccgagctggcagcgaaaaatgctcatcca
ttgaaggcggaagagaccaagcagcctgagctcccctttgctcccaatagaaaatcgcag
cagcagaaaatcaaactgacttctggcagcgaagatgctgtcttcgaagcacaacaggaa
ccgcccagcgaattcgaaccggataaccaggcagaactggtccccgccggcaagggactc
gacttccgtgaatctccgaaaacggcagctcccgcgctgagcgacgaaaatccgtttacg
aggactccccagccagagccagccgctcccgctgaaaagaaggctacggaaacggttgca
gagcccgcttttgatgcggggcctcaatttggcccagccatggctgctccggcaaccgct
gattcaaagggcccgaaaactgaagttcccccgcgggaaaccctggtgaccgaactggat
tcttccaatccgtttgaatcgcagtcgtcagagaccaagccggcaaagactcccgcgcct
gccagtgccaagccggaacccgaaccgttcaacctggggcccgaaccggaacccgccgcc
aaagagaatccctttccagaggaatcctctcccgctgcaaaactggagaccggcgagcct
ccctttgaattaaaaccggaaccggttccagaaacgcctgccgtcgatgcgaacccgttc
atgacgactcctgaggaactgaaagccgctccccaaccggcagcgccagccgcgataccg
gcaactccgaaagtggaaccggaattcaatccgttctctgacgagccccagatgaaggca
ccggaactgaaatcggcaaaggaagagaacactccgtccgagtttgaaatccaaccgaag
aaagagccagctcctgcagagccgaccttcagcatcaatcccgcaccgacgacaccggtt
gaaacgcctgagcagccagtgactcctgccagtaaggagcagtcagacccggatgtcgtc
gtaatcaagaagcgtcagccggaagacaatccacgcgagccgtcgctgtttgctcccgaa
gggaaaaccgcagacaagctggagcctgccgctccccaaccgattgagattgcgccctct
gccgagccaaagccattaaatctggtcgaaggcagccagcctgaaccaggcgaaccggct
cagctcaacatacagcagaaagtccagtcccccaaaatgacgattcagaaaatcgcgccg
ccggaagcggttctgggacaacctttcatctatcatgtgctggttaaaaacagcggtacg
acctccgcccgcgaagtggtcgtggaagaccggattccgtcgggtgcaaaactgaccgga
accatcccgcgggcagagcagatcaatgatcgcatcatctggcggctgggagcgatgggc
cccggagaagagaagaagatttccatccgcgtgattccggaaaaaccgggacagatcggc
agtgtggcgacggttaattttgtcaccgaagtcgcctcggaaacgaaaatcacgtctccg
cagttgagtatcaaatccgatcagccatcagcagtcaaaccgggagaggttactgtcgtg
aactacacgattaccaataccggttcgggagatgcaaaaaatgtgtatgtgcgcagcatc
attccaccccagttttctcatccgggaggtgacgatctggaataccatgtgggtgtgatt
cccgcaggcgaaaccagagaagtccagttgcagttgaaagcgatcaaaccgggggccggg
aaaaacgtctccagcgtggtgggcgatggcaatctgaaagcggagacgaccgttccgctg
aaagtgatcggtaacagtgaagagttcctgatcacccgtaaggggccgaaaaaccgctac
ctgggtcgggccggcgtctatgaaaatacaatcgccaacaacaccgaacaggcgattaaa
aacatttcaatcttcgaatccgttccccctggaatgaagttcatttccgcttcaggcaaa
ggtcagttcgataccgtccgcagagtggtgcaatgggatatcgctgaactggcagggggc
atgcagcaggtcttctcggtcgaactggagccaaccgaggtcggcaaaaaagtcagcacg
gtccaggtcgtgaccggcaataacagtaagttctcagccaatctgcagtcagaagtgaat
ataatcggacagccgctgctgaaagtggaaacgagcgagctcaaaggtcccctggaagtc
ggcgaaaaaatgtcgctgcaggtccagctggtcaaccagggcagcgccccggccaacaac
gttgaattccgcgtgaagatccctcaggaaatggtgtttgtcgctgccaaaggccccgcc
cgttacaagcaggctggttcgttcgtgatcttcgaaagcgcccaggtcctggctccccag
cagtcactcgatttcgaactgacactggcggccaggaataaaggggacgcgcgggtgctg
gtcacggtgcagtctcagcagatggaaaaaccgctcaaccaggaagaagcaattccgatt
ctggataagctgcaataa
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