Gimesia panareensis: Pan110_29310
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Entry
Pan110_29310 CDS
T07079
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gpn
Gimesia panareensis
Pathway
gpn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pan110_29310 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpn02000
]
Pan110_29310 (appA)
Transporters [BR:
gpn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pan110_29310 (appA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDU50579
LinkDB
All DBs
Position
complement(3868518..3870479)
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AA seq
653 aa
AA seq
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MYDVSALNRLLLTILLTFCLTGCPGPVPNSSSENAETSESSENGSETETEKSPLEPLLEP
FDAPSLADLDAKVKWKEQPVLDSLELLRERQSKEKQLVSVDEALKLKNTNQDINEKILSA
LGRLPENDEVVDWGATINRHVGADMKSTNPIMGSSAVEFEVGSLTGFGLFSFDWNFRPFA
VSDTVVSWQTSEDNKYDKVVMRDDLTWSDGTPITAHDIVFSFKTIMNPAVPVPAVRSGTD
QIRWIEAYDDQTLVYFHKEALPTNVWNLNFPIIPKHIYEKELDTDPTLQDSEYHVKYENN
PVTGGPYEIEKRVRGQEILLRRREGWYMQDGKQVRSRPYFERVRLRIIEDPNTALLALKK
GEIDEMALNPELWKTQTEGDDFYKTCTKANGLEWVYFYFGWNCETLFFQDKKVRTAMAYA
FNHKEMLDELCYGLYQPCTGIFHETAWMAPKPMTKPFHQDLKKAEQLLDEAGWIDHDGDG
IRDKEFDGKTIPFRFSIMTANRPLSLSICTLLKENLDQIGIICEVKQTEFTVMQEKARKH
QFQAMFGGWGTGTDPDTSINLWKTGAGRNYGQYSNPEVDKLFEEGRREFDKEKRAEIYGK
IHKLLYEDQPYTWLYFRNSFYGFNKDLRGYVFSPRGPYGYGPGFGSLWKPVSK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgtatctgccctgaatcgattgcttttgactatcttacttaccttctgcctg
acagggtgccccggtccggtaccgaattcgtcaagcgagaatgccgaaacgagtgaaagt
tcagaaaacggatcggaaacagaaacggaaaagtcacctctggaaccactcctggaaccc
ttcgatgccccttcactcgcggatctcgatgcaaaagtaaaatggaaggaacagccggta
ctggacagtctcgagctgttacgcgagcgtcagagcaaggaaaagcagctggtcagcgtg
gacgaggcactgaagctgaaaaataccaaccaggatatcaatgaaaagattctgagtgca
ctcgggcgtcttccggaaaatgacgaagtcgtcgactggggggcaaccatcaatcggcat
gtcggtgccgacatgaaaagtacgaatcccatcatgggcagttccgctgtcgagtttgaa
gtcggttcactgaccggttttggtctcttcagttttgactggaatttccgaccgtttgca
gtttcagataccgtcgtttcctggcagaccagtgaagataacaagtacgacaaagtggtc
atgcgggatgacctgacctggtcagacggcacgccgatcaccgctcatgacattgtgttt
tccttcaaaaccatcatgaatccagcagtccctgttccagccgtccgctcgggaaccgac
cagatccgctggattgaagcttatgatgaccagacgctggtctacttccataaggaagcg
ctgccgaccaacgtctggaatctgaacttcccgattatccccaagcacatctacgagaaa
gaactggataccgatccgactctgcaggacagtgaatatcacgtcaagtatgaaaacaat
cctgtgacgggtggtccttatgaaattgaaaaacgggtgaggggacaggaaattctgctc
agacgccgagagggctggtacatgcaggatggcaagcaggttcgcagccgtccctacttt
gaacgggtccgcctgcggatcatcgaagaccccaacacggcactgctcgccctcaaaaaa
ggtgagattgatgagatggccctcaatcccgaactctggaaaacccagactgagggggac
gatttctataagacctgcacgaaagccaatggtctggagtgggtctatttctactttggc
tggaactgtgaaacactcttcttccaggacaaaaaagtccggacggcaatggcgtatgct
ttcaatcataaagagatgctggacgagctctgctacggtctttatcagccttgtaccggt
attttccacgaaaccgcctggatggctcccaagccgatgaccaagccgtttcaccaggat
ctgaagaaagccgagcaactgctcgacgaagccggctggatcgaccatgacggcgacggg
atccgcgataaagaattcgacgggaagacgatcccgttccgcttcagcattatgaccgct
aaccgtcctctgtcgctatcgatctgtacgctgctcaaagagaacctggatcagatcggg
attatctgtgaagtcaaacagaccgaattcaccgtgatgcaggaaaaggcacgcaagcat
cagttccaggcgatgttcggtggttggggaaccggcaccgatccggatacttcgatcaac
ctctggaaaaccggcgctggtcgtaattatggacaatactcgaatccagaagtcgacaaa
ctgtttgaggaaggacggcgggaattcgacaaagagaaacgtgctgagatctacgggaaa
atccacaagcttctctacgaggatcagccctacacatggctctacttccggaattccttc
tacggcttcaacaaagacttacgcgggtacgtcttcagccctcgtggcccttatggatac
ggccccggctttggcagtctctggaagcctgtcagcaaatag
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