Gimesia panareensis: Pan110_33230
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Entry
Pan110_33230 CDS
T07079
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpn03016
]
Pan110_33230 (truB)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pan110_33230 (truB)
Transfer RNA biogenesis [BR:
gpn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan110_33230 (truB)
Prokaryotic type
Pan110_33230 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QDU50962
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All DBs
Position
4458599..4459528
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AA seq
309 aa
AA seq
DB search
MSGSSSKAGLQLSGLLSVNKPQDVTSRQVVNQFQKLVHPARIGHAGTLDPLATGVLVLCI
GQATRLIRFVQDQPKEYIGEFVLGKRSDTDDITGEVVDTPDCPVIEREQLEHYLSNYRGS
IEQIPPQYSAVHIDGRRAYDLARRGESFEIEPRTVDVYELEVSEFEFPRFQLRIVCGSGT
YIRSIGRDLGEDLGVGATMTSLVRTRIGEFNLDSSLSLEKPPTLETITAHLQPPIRAVPH
LPHYQCDARELRALRLGQKLTCDPARLPDVDEIIEIAAITPDGDLVAIAEWDRSHQRLSP
RQVYAERSQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcttcttcaaaagcaggcctgcaactctcaggcctgttgagcgtgaataaa
cctcaggacgtcacttcccgtcaggtggtgaaccagtttcagaaactggtccaccctgcc
agaatcggtcacgcggggacgctggatcccctggcgacgggagtgctggtgctctgcatt
ggtcaggcgacccgattaattcgctttgtgcaggaccagccgaaggagtacatcggcgag
ttcgtcctgggcaaacgcagcgataccgatgatattacgggcgaagtggtcgacacgccg
gactgccccgtaattgaacgggaacagctggaacactatctgtcgaactatcgcggttcg
atcgaacagattcccccgcagtactcagcggttcacattgatggcaggcgcgcgtacgat
ctggcgcgccggggtgagtcgtttgaaatcgaaccccggaccgtcgatgtgtacgaactg
gaagtcagtgagttcgagtttccccggtttcaattgcgaattgtctgtggttcgggaacc
tacatccgttcgatcggtcgggatctgggtgaagacctgggtgtgggtgccacaatgacc
tcactggtccgcacccgaatcggtgaattcaacctggattcgtcgctgtctctcgaaaag
ccgcccaccctggaaacgatcacagcacatctgcaaccgccgatcagagccgttccccac
ctgccacactaccagtgtgatgcgcgggaactgcgggctctccgcctgggacagaagctg
acctgtgatccggcccgactgcctgatgtcgacgaaatcatcgaaatcgcggcaatcacc
ccggatggcgacctggtggcgattgcggaatgggaccggtctcaccagcgactctctccc
cggcaggtttatgcggagcgttcccagtag
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