Gimesia panareensis: Pan110_33690
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Entry
Pan110_33690 CDS
T07079
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan110_33690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_33690
Enzymes [BR:
gpn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pan110_33690
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pan110_33690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDU51008
LinkDB
All DBs
Position
complement(4512296..4513189)
Genome browser
AA seq
297 aa
AA seq
DB search
MSDQEQQRAQRAVRQFMESWQRSGLSHIKHIEPTPVVPTPSVNVPETPVPETKTPLQTRP
AEAVSPPERMPVSVGEPVAEVTTATAEPRKEMSVPRTTKSKLSKADRQAQLEIVAGEVSQ
CQKCPELASTRTQTVFGVGNPKAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQM
KRSEIYIANILRCRPPGNRNPTDQEAANCRGFLDSQIEIVDPDYIVCWGSVAAKNLLHSE
MPIGKMRGQFYEYGRAKVVCTYHPSYLLRNPSAKKNVWDDMIFLFQDMGIDLKATQN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaggagcaacaacgggcacaacgggccgtacgtcagtttatggaaagctgg
cagcggtctggactgtctcatattaagcacatcgagcctacgccggttgtgccaactcct
tctgttaatgtaccagagactcctgtacctgaaacgaaaactcctcttcagactcgtcct
gctgaagcggtcagtccaccagaacggatgcctgtctcagtgggtgaaccagtagcagaa
gttactacggcgactgcagaacctcgaaaggaaatgagcgtgccacgaacgacaaaatcg
aaactttccaaggcagatcgtcaggcacagttggagattgtggccggggaagtttcccag
tgtcagaaatgcccggaactggcttcgacccgaacccagacggtgtttggtgtcgggaat
cctaaagcaaagatcatgtttatcggcgaagcccccggggcggacgaagacaaacagggc
gagcccttcgtggggcgggcagggaagctgctggataaaatcatcgaagcctgtcagatg
aaacgcagcgagatttatatcgccaatattctcagatgccgtcctccgggaaaccggaat
ccgaccgaccaggaagctgcgaactgtcgcggtttcctcgattctcagattgaaattgtc
gatccggattatatcgtctgctggggctccgtagcggccaaaaacctgctgcattcggaa
atgccgatcggcaagatgcgggggcagttttatgaatacggacgggctaaagtggtctgt
acttatcatccgtcgtatctgttacgaaatccttccgcaaagaagaacgtctgggatgac
atgatcttcctgtttcaggatatgggaatcgacctcaaagcgactcagaattaa
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integrated database retrieval system
