Gimesia panareensis: Pan110_41830
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Entry
Pan110_41830 CDS
T07079
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan110_41830 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_41830 (mutM)
Enzymes [BR:
gpn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pan110_41830 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pan110_41830 (mutM)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pan110_41830 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QDU51814
LinkDB
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Position
complement(5514010..5514861)
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AA seq
283 aa
AA seq
DB search
MPELPEVETMVRGIREAVEGAQIREFQKCRCACKPISMKPGFKSIQKKVLNQTVISARRL
AKRVILDLDNELSFVIEPRMTGLMLLSDPPDREHLRLEWQLQKGRAQTSLWFWDRRGLGT
VQLLKKSELDLVLGPQKLGPDALALTLKDLEQRCHRTSRAIKVALLDQKLVAGIGNLYAS
EILHLSRIHPERPANELSKAELKALQQATRKILKAAIRYEGSTLGDGTYRNALNKSGGYQ
NHHRVYSRAGEHCPTCQGAEIVRIVQAQRSTFYCPCCQVKNSL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagctgccggaagtggaaaccatggtgagaggaattcgtgaggccgtcgaagga
gctcagatccgcgaattccagaaatgccgctgtgcctgtaagcccatctccatgaaacca
ggcttcaagtccatacagaaaaaggttttaaatcaaactgtcatttccgcccgccggctg
gccaagcgggtgatcctggacctggacaatgagctttcttttgtgattgaaccgcgaatg
actggactgatgttgctgtctgacccgccggaccgggaacacctgagactggaatggcaa
ctgcagaagggacgcgctcagacctcgctctggttctgggaccgccgtggtctggggacc
gttcagcttttaaaaaaatcggaactggatctagttctggggccgcagaaactcggtccg
gatgcgctggcgctgactttaaaggatctggaacagcgttgtcaccggactagtcgggcc
atcaaagtggccttactcgaccagaaactggtggccgggattggtaacctgtatgccagt
gaaattttacatctcagccggattcacccggaacggcccgccaatgagttatcgaaagcg
gaactcaaagccctgcagcaggcgacgcgtaagattctcaaggcggcaattcgctatgaa
ggttcgaccctgggtgatggcacttatcggaatgctttgaataagtcgggggggtaccag
aatcatcatcgcgtctacagccgggcaggggagcattgtccgacctgccagggggcagaa
atcgtgcggattgtccaggcacagcgttcgactttctattgtccctgttgccaggtcaaa
aacagtctctga
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