Gimesia panareensis: Pan110_47050
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Entry
Pan110_47050 CDS
T07079
Symbol
csd_1
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gpn
Gimesia panareensis
Pathway
gpn00450
Selenocompound metabolism
gpn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Pan110_47050 (csd_1)
Enzymes [BR:
gpn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Pan110_47050 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Pan110_47050 (csd_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
QDU52331
LinkDB
All DBs
Position
6159830..6161083
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AA seq
417 aa
AA seq
DB search
METVVSPLDNTEFDVDTVRRHFPILGSRVHGHPLIYLDNAATTQKPQAVIDAIVDYYTST
NANIHRGVHQLSVDATRMHDNSRAKVKSFLNADEIAEIIFVRGATEGINLVASTFGKERV
GPGDEVVITAMEHHSNIVPWQVLCEQQGANLRVAPIDEQGQLLWDDFESLINKRTKLVAV
AHVSNALGTVNPIREIVSLSHQHGAAVIVDGAQAAAHMPVDVQDLDCDFYVISGHKLYGP
TGIGVIYGKRELLESMPAYQTGGDMISSVTFEQTTYNTLPHKFEAGTPDIAGAIGLGAAI
DYLKQLDWPAVCAHEEELLTHATDALSSINGVRIIGTADEKRAVLSFVIEGAHPHDIGTI
LDHEGIAVRTGHHCAQPVMERFGVPATIRISLGLYNTRDEIDATVCAINKVKEVFRC
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagacggttgtgtcaccgctggataatactgaattcgacgtcgatacagttcgtcgg
cacttcccgatcctgggcagtcgagttcacggtcatccgctgatttacctcgataacgcg
gcgaccactcaaaagcctcaagcagtcatagacgcgattgttgactactacacatcgacc
aacgccaatatccatcgcggtgttcaccaattgagcgttgacgccacgcgaatgcacgac
aactcacgtgccaaagtaaagtcgtttttgaatgctgatgaaattgcggaaattattttc
gttcgtggagccaccgagggaatcaacctcgttgcgagcacattcggcaaagaacgggtt
gggccgggagacgaagtcgtcatcacggcgatggaacatcattcgaatatcgtgccttgg
caggtgttatgcgagcaacagggggccaatttgcgagtcgctccgattgatgagcagggc
cagttgttgtgggatgatttcgaatcactcattaacaagcggacgaaactggtcgcggtc
gcgcacgtttccaacgctctggggacggtcaatccaatccgtgaaatcgtatctctttct
caccaacatggtgctgcagtcattgttgacggagctcaggcagcagcacacatgcctgtc
gatgtgcaggatctggattgcgacttctatgtgatttccggtcataaactgtatgggccg
accggaattggcgttatatatgggaaacgcgagttgttggagtcgatgccagcataccag
acaggcggtgacatgatcagctccgtcactttcgaacagacgacctataacacacttcca
cacaagttcgaggcgggtacgcccgacattgctggtgccataggactgggtgccgcgatc
gactacctgaagcaactcgactggcctgcagtctgcgctcatgaagaagaattgctgaca
cacgcgacagacgctttgtcatcgattaacggcgttcgcatcatcggcacggcggatgag
aagcgggcggtgctgtcgttcgttattgaaggagcccaccctcacgacattggaacgatt
ctcgatcacgaaggcatcgcggttcgcaccggtcaccactgtgcgcaaccagttatggaa
cgttttggtgtgccggcaacgattcgtatttcactgggcctatacaacacacgggacgag
atcgatgcgacggtctgtgctatcaacaaagtgaaggaggtgtttcggtgttag
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