Gimesia panareensis: Pan110_48480
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Entry
Pan110_48480 CDS
T07079
Name
(GenBank) outer membrane porin HofQ
Organism
gpn
Gimesia panareensis
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Paralog
GFIT
Motif
Pfam:
Secretin
TPR_2
STN
YfdX
Secretin_N
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QDU52469
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All DBs
Position
complement(6332241..6337340)
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AA seq
1699 aa
AA seq
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MMTPQKNHNQSWCSGLKEGPTLGKAFGVLACTTLIAASMWLANLGNTTRKVAADVESNGQ
SISGRQQRSARYYLSLGTQYYERGQFAEAVEALEKASVSPGRLSQAEFRKMNEYLGRARS
RAAAPRQRQVVRAQSPAADSGFSAGYTNAEGKSLEEKKQLARQLLQSAREDIKLNEFAKA
RRKAGQAASLRLEYGPFDQRPEQILAEIARAEQRQQKSSPIQQAGGFTQNNSGVMQVAAV
EESAEGNPFGNSSGNPFDGTQTRKLTEKEQAVVLLKQARQSLKSGNYDDARTLALQAQDY
DVAYQLFEDRPQHILAEIERKTGAKIFAGQSKPSMPVAQSGPASSSKDQAARLLKQARTE
LKSGNLDSARELAQQASQLDVAYRLFDDRPELVLDEIKRAQSVGSLAANTGSRPQMASGN
TAAGGSKAQATDLLRLARLDIKKRDFESARQKVAQVQQMKVSYDLFDDRPELVLAAIDRI
SDEAATISGMKGLQQNQDAVRPRVNRLMEQAKLALQQGNKDEALMLASSAHKLAQTLDLK
FTPDAESPEDFIRRVGTASDTRLNPGNTSNDAKSNAEYARRLLASAREDLSKGRVQEARQ
KAEAAQEVDTAYSLFEDRPEQLLADIRKMAGQPGGLSQEEMYAAETERKKQFSQKLVAQA
RTDLKAGRFESARVNAQEALKVGSEFKPGEDSPQAILRDLESNMGSQTAQVASQKKNEAS
EIAVIHPGASALELYNLGMQRLAEGDRGAAYQAFLAAYQSGEKLDTHRAQQLQDAVRELA
PSRADRIRLVKNQTATDTPGVAAEQPSTIDLVEQKQAIEFSRLRSEVLNAIFKAERLRES
APTEALGVIDQAMSKVENSSLNKKSTQALIGSLQRTRTSIDSFRKQVAPLEELKKQNEEV
EDYINRRIKNKIRVEQELADLVEKFNELVDQRRYAEAEVVAKQAKDLDPQNPVTVTMEWK
AKFLRRDASNNAMRDRKEQNTWDQLNDVEEALADAYTPDIKFGRDAKEWAELTKRREKYH
AKNHNQKTEREIQIEESLDRPVNLSFEAEPLSNVMNKIQGLTGINIFLDSLGLEEEGVTT
DAPVTINVNGIKLRSALNLLLEPLNLSYTIDNEVLKITSRIRQQGTLRTETYPVADLVVP
IPNFAANGSMASNPYSQMGAVSYNSGIGGNQSTPGNFQVADPLAGGVPGANPWAGNAPTA
KVAGGGSNIDFDSLTELIVSTVEPDSWEEIGGAGSVRPFETTLSLVIRQTQKVHDEIANL
LEQLRRLQDLQVTIEVRFVTVSDRFFERIGVDFDFNVADTLGGPTVDNSGNPLPAFGQVN
LLNSTNQNGGGGNNNNNNQGQQGQQGQNTSSGQTGGQGVAPFSNPPTRTLINTNNFPKKG
TVIGMSAPDSFTPDLDVQFRQGSFEIGVPEFGSFNANAGVNVGLAILSDIEAFFFINAAQ
ADERSNLMFAPKVTLFNGQVAFVTSNVSRPFVISLVPTVGNFSVGFTPVIANIPEGVSLT
VSAVISADRRYVRLSVNPNFTNVTDVFTFSFQGGAGGGQQGQQGGQLGQQGGGQLGQQGG
GNFGNGVGAGLGGIGGIGGGGGNTGGGGFGQTGQQGQQGQQGQNGGGGLGTTTIQQPVVE
QVTVTTTVSVPDGGTVLLGGVKRLREGRSMAGVPILNKLPYVSRLFKNTGVGRETESLMM
MVTPRIIIQEEEEEALLGY
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcctcaaaaaaatcataatcaaagttggtgttctggcttgaaggagggacct
acattgggcaaggcatttggagtactggcctgtacgacgttgattgcagcgtcgatgtgg
ctggccaatcttggcaacacgaccaggaaggtcgctgctgatgtcgagagtaacggtcag
tcgatctctgggcgtcaacagcgctcagctcgttactacctgagtctggggactcaatac
tatgagcggggacaattcgctgaagcggtagaagctcttgaaaaagcttctgtctctccc
gggcggttgtctcaggcagagtttcgcaaaatgaacgagtacctgggaagggcccgttcg
cgagctgccgctcctcgacagagacaggtagtccgggcccagtcgcctgctgccgattcc
gggttttccgccggctacacgaatgccgaaggaaagtccctggaagagaaaaagcagctg
gcccgtcagttactgcagtccgctcgtgaagacatcaagttgaacgagtttgccaaggcc
cgccgaaaagccggccaggctgcatcgctgcggctggaatacggtccgttcgatcaacgc
cccgagcagatccttgctgaaattgctcgcgcagaacaacgacaacagaaatcatcgccc
attcagcaggccggcgggttcactcagaacaactccggtgtgatgcaggtggcggctgtc
gaagagtctgctgaaggaaatcccttcggtaattccagcggcaatccgtttgacggaacc
cagactcgcaagctgacggagaaggaacaggctgtggtcctgctgaaacaggcacgccag
tctctgaaatccggaaactatgatgatgcccgcacacttgccctgcaggcacaagattat
gatgtcgcttatcaactctttgaagatcgccctcagcatattctggcagaaattgaacgc
aaaaccggtgcgaaaatcttcgccggtcagtcaaagccttcaatgcctgtcgctcagtct
ggtcctgcttcctccagcaaagatcaggcagcccgcctgctgaaacaggcccggacagaa
ctcaagtcaggtaatctggactccgcccgcgaactggcccagcaggccagccagctggat
gttgcctatcgactgtttgacgatcgtccggaactcgttctggatgagatcaaacgtgcc
cagtctgttggatcactggcagcaaatacaggcagccgtcctcagatggcttccggcaat
actgctgcaggcggttcgaaggcacaggcgactgatctgctcagactggctcgcctggat
atcaagaagcgtgactttgaaagtgcccgccagaaagtggctcaggtacagcagatgaaa
gtttcttacgacctgtttgacgaccggccagaactggtgctggcagccatcgatcggatc
tctgacgaggcggctaccatctccggtatgaaagggctgcagcagaaccaggacgctgtc
cgtccccgggtaaaccggttgatggaacaggctaagctggcactgcagcagggaaataaa
gatgaagcgttgatgctggcttcctctgcccataagctggctcagacactggatctgaaa
ttcactcccgatgcggaatctcccgaagacttcattcgtcgcgtgggaaccgcttctgat
acccgtctcaatccgggtaataccagcaatgatgcgaaatccaatgctgagtatgctcgc
cgtctgttagcctccgcccgcgaagacctctctaagggtcgggttcaggaagctcgccag
aaggccgaagcagcccaggaagtagatactgcctacagcctgttcgaagatcgtccggaa
cagctcctggcagacatccgcaagatggctggtcagcctggtggattgtcacaggaagaa
atgtatgcagcagaaacagaacgtaaaaaacagttctctcagaaactggtggctcaggcc
cggaccgacctgaaagcaggtcgcttcgaatcagcccgggtcaatgctcaggaagctctg
aaagtgggctccgagtttaaaccaggtgaggacagtcctcaggccatcctgcgtgacctg
gaatccaacatgggttcacagaccgcacaggttgcctctcagaaaaagaacgaagccagc
gaaatcgctgtgatccatcctggtgcctctgctctggaactgtataacctcggtatgcag
cgactggctgagggcgaccgtggtgccgcttaccaggcattcctggccgcataccagtct
ggtgaaaaacttgatacccatcgtgcacagcagttgcaggatgcggttcgcgaactggca
ccttcccgggcagatcggatccgcctggtcaaaaatcagaccgcaaccgatacacctggg
gttgctgctgagcagcccagcacgatcgatctggtcgaacagaaacaggcgatcgaattc
agccggctgcggtcggaagtcctgaatgcgatcttcaaagccgaacgcctgcgggaatct
gcaccgacggaagctctgggagtcatcgaccaggccatgtccaaggtcgaaaactccagc
ctgaataagaaatcaactcaggctctgatcggatctctgcagcgaacccggacttcgatc
gactctttccgcaagcaggttgctccgctggaagagctgaaaaagcagaacgaagaggtt
gaagattacatcaaccgacgtatcaaaaacaagatccgtgtggaacaggagctggctgac
ctggtcgaaaagttcaacgaactggtagatcagcgacgctatgcggaagcagaagtggtc
gctaaacaggccaaagatctggatccgcagaacccggtcaccgttaccatggaatggaaa
gcgaaattcctcagacgggatgcttccaacaatgccatgcgtgatcgtaaggaacagaat
acctgggatcagctgaacgacgtggaagaagcactggctgatgcctacacaccggatatc
aagtttggtcgtgacgctaaagagtgggctgagctgaccaagcggcgtgaaaagtatcac
gctaaaaaccacaatcagaaaacggaacgcgaaattcagattgaagagagcctggatcgt
ccggtcaacctctcatttgaagccgagccgctgtcgaacgtgatgaataaaattcaggga
ctgaccgggatcaacatcttcctggacagcctgggactggaagaggaaggggtgactacc
gacgcaccggtcacgattaacgtgaacggcatcaagctgcggagtgccttgaaccttctg
ctggaaccgctgaacctgtcttacacgatcgacaacgaagtgttgaaaatcaccagccgc
atccgtcagcagggaactctgagaacagagacctaccctgtggctgacctggtggttccg
attccgaacttcgctgcgaacggcagcatggccagcaacccatacagtcagatgggtgcg
gtcagctataattccggaattggcggaaatcagtcaacacctggtaacttccaggtcgct
gatccgctggctggtggagtccccggagccaatccgtgggccgggaatgctccgactgcc
aaggtggccggcggtggatcgaatatcgacttcgattcactgaccgaactgattgtctct
accgtcgaacccgattcctgggaagaaatcggcggggcaggcagcgtacgaccttttgaa
actaccttgagcctggtgattcgtcagactcagaaggtacatgatgaaatcgccaacctg
ctggaacagctgcgacgtctgcaggacctgcaggtcaccattgaagtccgctttgtgacc
gtctccgaccgcttcttcgagcgaattggtgtcgacttcgacttcaacgtggctgatacc
ctgggtggcccgaccgtggacaacagcgggaatcccctgcctgccttcggccaggtcaac
ctgttgaacagcaccaaccagaacggtggtgggggtaacaataacaacaataaccagggc
cagcagggccagcagggccagaatacgtcgagtggtcagacgggtggtcaaggggttgca
cctttcagtaatccgccgacacgaactctgattaacaccaataacttccccaagaagggg
acggtgattggtatgagtgcacctgactccttcacacccgacctggatgtgcagttccgt
cagggatcattcgaaatcggtgtacctgagttcggcagcttcaacgcgaacgctggtgtg
aacgtaggtctggcaattctgagtgacattgaagccttcttcttcatcaacgccgctcag
gcagatgaacgatcgaacctgatgtttgctccgaaagtaacattgttcaacggtcaggtc
gcctttgtgaccagtaacgtatcgcggcccttcgtgatcagcctggtgcccaccgtgggt
aacttctcagttggcttcacaccggtcatcgcgaatatccctgaaggggtctcgctgaca
gtctcagctgtgatctctgcagaccgccgttatgtacgactctccgtcaacccgaacttc
accaacgtgaccgacgtcttcaccttctccttccaggggggagccggcggcggtcaacag
ggccagcaaggtggtcagttgggtcagcagggtggtggtcagctcggtcagcagggtggt
ggtaacttcggtaacggagtgggtgccggcctgggtggtatcggtggtatcggcggtggc
ggcggtaacacgggtggtggtggctttggtcagactggccagcagggccagcagggccag
cagggccagaatggtggcggtggtctgggaaccacaaccatccagcagcctgtggtggaa
caggtgaccgtgactacgaccgtgagtgtgcccgatggtggtactgtgctcctgggtggt
gtcaaacgactccgcgaaggacgcagcatggctggtgtcccgattctgaacaagctgccg
tatgtcagccgtctgttcaagaacaccggggtcggtcgtgaaaccgaaagcctgatgatg
atggtcaccccccggattatcatccaggaagaagaagaggaagcactcctcggatactaa
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integrated database retrieval system
