Gimesia panareensis: Pan110_51790
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Entry
Pan110_51790 CDS
T07079
Name
(GenBank) Bacterial type II/III secretion system short domain protein
Organism
gpn
Gimesia panareensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin_N
SLS
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
QDU52798
UniProt:
A0A518ADK3
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All DBs
Position
complement(6728745..6732506)
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AA seq
1253 aa
AA seq
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MNRNMKFHLSFFFVLFVALICSGSVHSVIQAQEPSPSGDRGGFGGRRDRGGFGGDRSRFG
GRGGFGGDRGGFRGGFGGGGFSGFRGAIGFMVMREEIQKELQLTEEQIKQLQEAAQAMRP
SRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGVLNEKQTARLKQLQL
QENGYRQLTDDETAKQLKLTDKQLQKIKELEEQRSDARRDLGRRASSEEREKLQQEFDQK
IEAILTKDQQTQWKQMLGPALVTEEKAPSTGAAPAVSSTPGPAPRPRPQIPTEPEGLKPE
DRSISFGAKAVAMNDKAADGETVPAKKPGEVGKMSFNFRFAPWGDVLKLFAESAGYTLDL
NDVPPGTFNYYDQGSYTPTEALDIINGYLLQKGYVIVRRNQFLVVLNIDNGIPPNLVPIV
DAGELDQRGKNELMSVTFQLEGVDIDQVAKEVQAILGPQGKSVALKTANSIIVTDIGSNL
QRVKKLLEGAIANAGPTDLAFRSFELQFIDANEAEKILRSQFGLPASTQNVSASASSSSR
YYDYRRRSSRDSSPPPQQATKDSTTQVTADPRTNRLLVTATPAQIKLAEEIIKSIDVDEG
NLLSPGGNKPFLRVYSVSSSDSREVTKTLDAMMPGVVVNEDGRNNKIHILATPKEHQEIE
GMIRQLDGEGGSQSVSVINLSKLDPLSATTTLRSLFLRDGNDAPTIEADLLGRRLLIRGT
PDQVIQVKALLAQLGEDGTGRVEEDANRGPIRTIPLGGRDSREILQLIDKLWSASSGDEN
PIRIVVPSEGNQIRERVLGEDENPVRNRGYRNPSRNISTPLNRPIRQERREADSDQTRFL
FTASEQKTETNLEANAEAEKQSTESGQKSTKAATDAEKKNPIAVSTNGDNLIITSTDQEA
LNRLEKMIEALTQAIPPKNQWTVFYLRSADATATAKMLESLFPSSSVSDSVGDSSMLSGL
SSIGGGLMDATGLSTLGMGPQTLRIIPEARSNALYVTGPPDKVRSVEQMLKVLDASELPD
SLRDRSPGIIPVEYASATEVANIVKELYKDYMQAPQPQNNSRGGGNPFAAMMGGRGSQNS
SNAKPPEAKLAVSVDANANQLLVSANDSLFQEIESLVRELDYSAQMSRKSVRVVTLNNGN
SALIQNALTSLLPNVSVSTTGSDSRKKTTEPTPSSSNPSDNSPGSSDRGEEIRRFFEQRM
RERMGGAPPGGDSGRGSSSPFGGRSSRGFRFPGSDGGSRGGSSSRFGGRSRGR
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaaatatgaaattccatctcagttttttctttgtcctgtttgtcgcactgatc
tgttcaggttctgtacactccgtgatccaggcacaggaaccatcaccatccggggatcga
ggtggttttggaggccgcagggatcgtggtggcttcggtggtgaccggagccgatttggt
ggccggggcggttttggaggagatcggggtggttttcgaggtggcttcggcggaggcggt
tttagtggcttccggggggcaatcggttttatggtgatgcgtgaggagatccagaaagag
ctccagctcaccgaagagcagatcaaacaactccaggaagcggctcaggcgatgcgtccc
agccgggagtcgatggagccctttatgaatcgcatgcgggatgcgcagaccgacgaagaa
cgcaccaaggttcgcgaagagatgagtgcctccttcgaaaaacagcgcaccgaaggggaa
gcgaaactctggggagtcctcaatgaaaaacagacggcacgactgaaacagctgcaactg
caggaaaacggttatcgtcaattgactgacgacgaaacggcgaagcagctcaagctgacc
gacaagcagttgcagaaaattaaagagctcgaagagcagcgttccgatgcgcgacgcgat
ctgggacgtcgtgcctcttcagaagaacgggaaaaactgcagcaggaatttgatcagaaa
atcgaagcgatcctgaccaaagatcaacagacacaatggaagcagatgctgggaccggca
ctggtgacagaagaaaaggccccttcgacgggagcagctcctgctgtcagcagcactccc
ggccctgccccacgaccccgaccgcagattccaactgagccggaggggctcaaaccggaa
gaccgcagcatttccttcggtgccaaagcggtggcgatgaacgataaagccgcggatggc
gagaccgttcccgcgaaaaaacccggggaagtcggcaaaatgtcattcaatttccgcttt
gctccctggggcgatgttttgaaattatttgcagaatcagcgggctacaccctcgatctg
aatgatgtcccccccggcacattcaactattacgatcagggttcttacacacccaccgaa
gcgctggatattatcaacggctacctgctccagaaaggttatgtgattgtccgtcgcaat
cagttcctggtggttttgaacattgacaacggcatcccgccgaatctggtaccgattgtc
gatgccggtgagcttgaccagcgtggtaaaaatgaactgatgagcgtgaccttccagctg
gaaggtgttgacatcgatcaggttgccaaggaggtacaggccatcctcgggccccagggc
aaatcagtcgcactgaaaacagccaactccattatcgtcaccgacatcggcagtaatctg
cagcgtgtcaaaaaactgctggaaggcgcgatcgccaatgccggcccaaccgatctggca
tttcgctcattcgagttgcagttcatcgacgcgaacgaggcggagaaaatccttcgcagt
cagtttggtctgcccgcttcaactcagaatgtgagtgccagtgcgagctcttcttcaaga
tattatgattaccgtcgtcgcagcagtcgtgacagctcgcctccccctcagcaggcgacc
aaggattctaccacacaggtgaccgctgatcctcgtacgaatcggctgcttgttaccgca
actccggctcaaatcaagctggcagaagaaattatcaaatccattgatgttgacgaaggt
aatctgttgtcgcccggtggcaataaaccttttctgcgcgtctactccgtcagctcctcc
gattcacgtgaagtgacaaaaactcttgatgccatgatgccgggcgtcgttgtcaatgaa
gatggacgtaataacaagattcatatcctcgcgactcccaaggagcaccaggaaatcgaa
gggatgatccgccagctggatggcgaaggggggagccagtctgtctctgtgatcaacctg
agcaaactggatccgctttcggcaaccaccaccctccgctcgctgtttctgcgggatgga
aacgatgctcccaccatcgaagcagacctgttgggacgtcgtctattgattcgcggcaca
ccggatcaggtcattcaggtgaaagccctgctggcccaactgggtgaagatgggactggt
agagtcgaggaagatgccaaccgtggtcccattcgtaccatccccctgggaggtcgggat
tctcgggaaatcctgcagttgattgataaactctggtcggcttcatctggtgatgaaaat
ccgattcgcatcgtggttccttcagaaggaaatcagattcgggaacgggtgctgggtgaa
gatgagaatccggttcgcaatcggggttatcgaaatccgtctcgcaatatcagtactcct
ctcaaccgtccgattcgacaggagcgtcgagaagcagactcggatcagacacgattcctg
tttactgccagcgaacaaaaaaccgaaaccaatttggaagcgaacgctgaagcggaaaaa
cagtcaacagaatcagggcagaagtcaaccaaggctgccactgatgcagagaagaaaaat
cctatcgcggtttctacgaatggcgataacctgattattacgtccaccgatcaggaagcc
ctgaatcgtctggagaaaatgatcgaggcgttaacccaggcgattcccccgaagaatcaa
tggacggtcttttatctgcgttctgcagatgcgaccgccacagccaagatgctggaaagc
ctgttccccagcagctctgtctctgattcagttggggattcaagcatgctgagtggactc
tcttcgatcggtggcggcctgatggatgcaaccggtttatcaaccctggggatgggacca
cagacactgcgtatcattcccgaggcacgctccaatgcactgtatgtcacagggcctccc
gataaggtgcgctccgtcgaacagatgctcaaagtcctcgatgcttctgaattacccgat
tccctgcgggatcgttcccccgggatcattcccgtggaatatgcttctgcaacggaagtc
gcgaatatcgtcaaagaactttacaaggactatatgcaggctccccaaccgcagaataac
tcacgggggggcggaaacccctttgccgccatgatggggggcagaggatcacagaattct
tccaatgccaaaccgcccgaagcgaagctggcggtcagcgtggatgccaacgccaaccag
ttgctggtttcggccaatgattctctgttccaggaaattgaatctctggtgcgtgaactc
gattactccgcgcagatgtcccgcaaatcggtccgcgttgtcacattgaataatggcaac
tcggctttgatccagaatgctttaacttccctgctgccgaacgtgagtgtcagtaccaca
ggcagtgactcccgtaagaaaacaaccgaacctactccctccagttccaacccgtctgat
aattcacccggttccagtgatcgaggcgaagagattcgtcgcttcttcgaacagcggatg
cgggaacgcatgggcggcgctcctccgggaggcgattccggtcgcggatccagttccccc
tttggcggccgttcctcacgtggcttccgtttccccggtagcgatggcggctcgcgtggc
ggcagcagcagtcgtttcggcggtcggagccgtgggcggtaa
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