Gimesia panareensis: Pan110_51920
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Entry
Pan110_51920 CDS
T07079
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpn
Gimesia panareensis
Pathway
gpn00061
Fatty acid biosynthesis
gpn00071
Fatty acid degradation
gpn01100
Metabolic pathways
gpn01212
Fatty acid metabolism
gpn02024
Quorum sensing
gpn04146
Peroxisome
Module
gpn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pan110_51920 (lcfB_2)
00071 Fatty acid degradation
Pan110_51920 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pan110_51920 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pan110_51920 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpn01004
]
Pan110_51920 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpn04147
]
Pan110_51920 (lcfB_2)
Enzymes [BR:
gpn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pan110_51920 (lcfB_2)
Lipid biosynthesis proteins [BR:
gpn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pan110_51920 (lcfB_2)
Exosome [BR:
gpn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pan110_51920 (lcfB_2)
Exosomal proteins of breast cancer cells
Pan110_51920 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDU52811
LinkDB
All DBs
Position
complement(6748573..6750186)
Genome browser
AA seq
537 aa
AA seq
DB search
MLCPTDFLSSLRLIQHPVALSPVTLLEESPSARAGAGLADLLLETVRRRSEQPVVSTSEQ
TLSYGDLILLVRRVAGQLSKTPGFETGSRVLLLVPNSVEYIAAFYAVLFSGGVVVPVPAN
TESGTLHNILESTQAICTITTSQVMRRHPDLEEFPAEGIDLQKSERGELSEDSMKPVLRS
AENLAAIFFTSGSSGTPKGVMLSHANLIANAQSIQEYLQLQNDERPLCILPFHHAFGNSV
LQSHLLQGAHLVLDGNTIFPESILEAMIRHECTSLSAVPDLFRILLERTSVKQTKFPHLR
YMSVAGGALPHAQAVEIRNVITPARFFVMYGQTEATARLAYVPPDQLIDVSDGTIGQAIP
GVTLQVVDERGQEAAAGTVGELRASGPNIMQGYWRDAEETRKRIRNGWLYTGDLATFDQS
GRVVIKGRRNSLVKISGYRVHPADLEQFALRTFPLSQAVAVPFEAKHTGTRLALYIETTP
EDAELTEAEMLSVCRSQLPRQLVPDRIRILQKIPLNHAMKVDRVKLSELAAVGDLQS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgctctgccccacagactttctttccagcctcaggctgatccagcatccggttgcactt
tctccggtaaccctgttagaggaaagcccctctgccagggcaggagcagggctggctgat
ctgttgctggaaactgtacgtcggcgaagtgagcaacctgtggtttctacttctgagcag
acactgagttatggtgatctgatcctgctggtcaggcgagttgccgggcagttgtcgaag
actcccggttttgaaacaggcagccgggttttgctgctggtccctaattctgttgaatac
attgccgctttttatgctgttttattttccggtggtgttgtcgtgcctgtacctgccaat
acagaaagtggcacgctccacaatattctggaatcaacgcaggcgatctgtacgatcacc
acatcgcaggtaatgagacgtcatccggatctggaagagtttccagcggaaggcatcgat
ttacaaaaatcagaacggggagaactttcggaagattccatgaaaccggttttgcgttct
gctgagaacctggccgcgatcttctttacctccggttccagtggcacacccaagggggtc
atgctgagtcatgcgaatctgattgccaacgcgcaatcgattcaggaatacctccagttg
caaaacgacgaacgtccgttgtgtattttgcctttccatcatgcgtttggaaattccgta
ctgcagtctcaccttctgcagggggctcatctggttctggacgggaataccatctttccg
gaaagtattctggaagcaatgatccgccatgaatgcaccagcctctctgcggttcccgac
ctgtttcgaatcctgctggaacgtacttcggtcaaacagacgaagtttccacatctgcgt
tatatgtcagtggcaggaggtgccctgcctcatgcacaggctgtcgaaatcagaaatgtg
atcaccccggcccgcttctttgtcatgtacggccagacggaggccaccgcccgactggcc
tatgtaccgccggatcaactgatcgatgtaagtgatggaactatcggccaggcaattccc
ggagtcaccttacaggttgtagatgaacggggacaagaagctgcagctggcacggtcggc
gaactgcgggccagtggccccaacatcatgcagggttactggcgggatgctgaggagacc
cgaaaacggattcgcaacggctggctctatacgggagatctggccaccttcgatcagtca
ggcagggtcgtcatcaagggccggcgtaattcgctggtcaaaatttccggttaccgcgtc
catccggctgatctggaacaattcgcgctacgaacttttcccctgtcccaggccgtagcg
gttccctttgaagcaaagcatacaggtacgcggctggcattatatatcgaaaccaccccg
gaagatgcggaactgacggaagcagaaatgctgagcgtctgtcgcagtcaactgccgcgg
caactcgtgccggaccgtatccggatcttacagaagataccattaaatcacgccatgaaa
gtcgatcgggtcaagctgtcagaactggcagcggtcggcgatctgcaatcttaa
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