Gimesia panareensis: Pan110_54260
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Entry
Pan110_54260 CDS
T07079
Name
(GenBank) Type II/IV secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gpn02044
]
Pan110_54260
02035 Bacterial motility proteins [BR:
gpn02035
]
Pan110_54260
Secretion system [BR:
gpn02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Pan110_54260
Bacterial motility proteins [BR:
gpn02035
]
Pilus system
Pilus assembly proteins
Pan110_54260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_23
AAA_29
AAA_16
AAA_22
AAA
AAA_11
AAA_30
ABC_tran
ATPase_2
AAA_19
AAA_14
DNA_pol3_delta_C
cobW
nSTAND3
Zeta_toxin
Rad17
ResIII
NPHP3_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QDU53043
LinkDB
All DBs
Position
complement(7044944..7046644)
Genome browser
AA seq
566 aa
AA seq
DB search
MADDWMQQLVDDGYLGPAQLDEASSLASSMGISPGEALVKLGYVGAEVIAQAQASMYGYE
FVELEGMEIPQSVIELVPESMARENTVIPVGMKGDSLQIALHDPMKYEVLDKLRFIINRD
IDVVMAPIEAIQSAINRHYGQSETESVDTMLKEFTETQIDITATELATSTNVEEEDESAP
VIRLANLIISEAVNMRASDIHVEPFEDRIRIRYRIDGSLIERDSPPRRLLSALVSRFKIM
ARMDIAEKRRPQDGRIKTTIGGKDFDLRVSILPTNHGQAVVMRILDRDNIKVGIRNLGFS
EENYRRFQTIIRRPNGIFLVTGPTGSGKTTTLYSALGELNRPDKKIITAEDPVEYYLPGI
NQVEVKHNIGLDFSRIIRAMLRQAPNVILVGEIRDKETAEMAIQASLTGHLVFSTLHTND
APGSVTRLIDMGVEPFLVASSVMAVMAQRLVKVVCGKCVEQYSPDPGELEYLGITPSQLE
GAIFNRGKGCKTCSHTGYKGRKAVFELMMMNTAIREMTFRSEASQNIRRQARLFGMKSLA
EDATDKALQGVTTLAEAMKLAKGLES
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgattggatgcaacagttagtcgatgatgggtatcttggtcctgcgcaactg
gacgaagcctcaagtctggccagttccatgggaatttcgcccggtgaagcattagtgaag
ctggggtacgtcggggccgaggtgatcgcccaggcgcaggcctcaatgtatggctatgaa
tttgtggaactggaggggatggaaatcccccagtccgtgattgaactcgttcccgagtcc
atggcccgggaaaatacggtcattcccgtggggatgaagggcgactctctgcagattgcc
ctgcacgatcccatgaagtacgaagttctggacaagctgcggttcattattaaccgtgat
atcgacgtcgttatggcgccgattgaagccatccagtccgcgatcaaccggcactacggt
cagagtgaaaccgagtcggtcgataccatgctgaaggaattcacagaaacccagatcgac
attacggcgaccgaactggcgacatcgaccaacgttgaagaagaggatgagagtgccccc
gttattcgactggcgaacctgatcatcagtgaagccgtgaatatgagggccagtgatatt
cacgtggaacccttcgaagaccggatccggattcgctaccggattgacggttcgctgatt
gagcgggacagcccaccccgacgtctgctctcggctctggtctcccgtttcaagattatg
gccagaatggatattgccgaaaaacggcgcccccaggacggtcgtattaagacgaccatc
ggggggaaggacttcgaccttcgtgtcagtattctgccaaccaaccatggccaggcggtg
gtcatgcgtatcctcgaccgggacaacattaaagtggggatccggaacctcggtttctcg
gaagagaactaccgacgcttccagaccatcatccggcgtccgaacgggatcttcctggtg
accggccctacaggaagtggtaaaacgacaactttgtacagtgccctgggggaactgaat
cgtcccgacaagaaaatcatcacggcagaggatccggtcgaatactacctgcccgggatc
aaccaggtggaagtgaagcataatatcggcctggatttctcacgaattattcgtgccatg
ttgcgacaggcaccgaatgtgattctggtgggtgaaattcgtgataaagaaactgctgag
atggcaattcaagcatctttgacaggacacttggtattcagtacccttcatacgaacgat
gcgcccggatctgtgacacgtttgattgatatgggtgtagaaccgttcctcgtggcatcc
agtgtaatggcggtcatggcacagcgtcttgtgaaagtggtgtgtggtaaatgtgtcgag
caatattcgcccgatcccggggagttggagtacctcggaatcacccccagtcagctggaa
ggggcgatcttcaatcggggtaaaggatgtaagacttgttcacataccggatataaaggt
cggaaagcggtcttcgagctgatgatgatgaataccgctatacgtgaaatgacttttcgc
agtgaggcttctcaaaatatccggagacaggcacgtttgttcggtatgaaatcactggcg
gaagacgccactgacaaggcgctgcaaggggtcactacacttgcggaagcaatgaagctg
gccaagggtctggagagttga
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