Gimesia panareensis: Pan110_57530
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Entry
Pan110_57530 CDS
T07079
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpn03019
]
Pan110_57530 (yhaM_2)
Messenger RNA biogenesis [BR:
gpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan110_57530 (yhaM_2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
MATCAP
SASH1_Homeodomain
Motif
Other DBs
NCBI-ProteinID:
QDU53363
LinkDB
All DBs
Position
complement(7438037..7439056)
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AA seq
339 aa
AA seq
DB search
MNTARQLLLLSEMEPGQMADSFVLLVSRERSTTRDGKPYFRVQFRDNATVATAMIWSDTP
WFEDCEANWTEGEFYKVRARYDENKYGPQLDIDRIRPVNEEDAEDGFDPGLYFKRSRFDS
EEMFAELAEIAREQITEEPLRDLVLDILEQYAGQIKVIAAASRNHHAFTGGFLEHVLSVT
RAASYLADKYSDYYQEMQPPLNKSLVVSGAILHDIGKLTELDYKPHASSYTPAGRLIGHI
LLGRDLVREHAAKFEDLSPETLLRLEHVIVSHQNLPEWGSPIAPHTPEALLVHYADDLDA
KFHMMATTLENILPGSEDAFSGRDNPLRRSIFLGLKSPE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgcacggcagttgttgcttctcagtgagatggaaccggggcagatggcagac
agctttgtgctgctggtctccagagaacgatcgaccacacgggacggcaagccctatttc
cgggttcagttccgggacaatgcgacggtggcgacagcgatgatctggagcgacactccc
tggtttgaagactgtgaagccaactggaccgagggggaattctacaaggtgcgtgcccgc
tacgacgaaaataaatacggtccgcaactggacattgaccggattcgcccggtgaacgaa
gaagatgccgaggatggattcgaccccgggctctatttcaaacgctcccgattcgacagc
gaggagatgtttgctgagctggccgaaattgcccgggagcagatcacggaagaacccctc
cgcgacctggtgctcgacattctcgagcaatatgcaggccagatcaaagtaatcgcggcg
gccagcagaaaccatcatgcattcaccggggggtttctggagcatgtgctctcggtcacg
cgggccgccagttacctggctgataaatacagcgactactaccaggaaatgcagcctccc
ctgaacaaatcactggtcgtgtctggggcgatcctgcacgacatcggcaagctgaccgag
ttggattacaaaccacacgcgtcgagttacacaccggcaggcaggctgatcggtcacatt
ctgctcggccgggatctggtgcgggagcacgcggcgaagtttgaggacttgagcccggag
acactgctgcggctggagcatgtgatcgtgtcgcatcagaatctgccggaatggggttcg
cccatcgccccgcatacgccggaagccctgctggtacattacgcggacgacctggatgcc
aagtttcacatgatggccacgacactggaaaatatcctgccgggcagcgaagatgcgttc
tccggccgtgacaatcccctgcggcggagtatctttctggggctgaagtcgccagaatag
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