Gimesia panareensis: Pan110_60530
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Entry
Pan110_60530 CDS
T07079
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gpn
Gimesia panareensis
Pathway
gpn03420
Nucleotide excision repair
gpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan110_60530 (uvrD1)
03430 Mismatch repair
Pan110_60530 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpn03400
]
Pan110_60530 (uvrD1)
Enzymes [BR:
gpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan110_60530 (uvrD1)
DNA repair and recombination proteins [BR:
gpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan110_60530 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
Pan110_60530 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Helicase_RecD
AAA_11
HHH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QDU53659
LinkDB
All DBs
Position
complement(7805362..7807443)
Genome browser
AA seq
693 aa
AA seq
DB search
MSEIPQQIEDLFEQLNPQQREAACHDAGSLLIIAGAGTGKTTTLSHRVAWLISQGIDPSR
ILLLTFSRRAANEMVRRVDALLRAMGDSRERAASARSRSIWGGTFHSTAARLLRRYGQSI
GLPDDFTIIDRSDAEDLMSSLRSELELGNNVAKFPRKGTLVEIYSRCVNTCLKLEPVLER
YYPWCLEHVDILKKLFQAFVDRKEQQNILDYDDLLLFWHALSSDPAGGKLLRGQFEAVLV
DEYQDTNVLQSGILKNLCPDGEGLTVVGDDAQSIYSFRAATVRNILDFPEEYPGTTVVTL
EENYRSTQPILAATNQIIDEAHERYEKKLWSSKIAGEAPFIVDCSDNNEQADFVVTQVLE
HLDAGIPLNQQAVLFRASHHSLALEVELARRNIAYHKYGGLKFIETAHVKDLMAYLRLAE
NPRDAVSGLRVLTLLPGIGQKKAQQLLNLLAESGFRFDAWSEFKPPAATVEHWPLFIRLM
KNLASPQSEKKGISSEVHQVRTFYSPLLDQQYDNAPARQRDLEQLEQVASRFSSRMSFLE
EITLDPPSSTQDIANDSSKTDDDFLVLSTIHSSKGLEWDAVYVLQAADGSIPSEMSLESN
DEIDEERRLFYVALTRAKNWLYVCFPHRQYFQNRRWNQAHSYAQLTRFISSKTLPLFQRR
PAFNAEDLDTPEEAQIETTAEDIRKNIRNMWSS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagattccgcaacaaattgaagacctgttcgagcagctgaacccccagcagcgg
gaggcagcctgtcacgatgccggttcgctgttgatcatagcgggtgcggggacggggaaa
acgacgacgctctcacaccgagtcgcctggctgatttcccagggcatcgatccgagccgg
attctgctgctgaccttttcccgcagagccgcgaatgagatggtccgccgcgtcgatgca
ctgttgcgggcgatgggcgacagccgcgagcgcgccgcttcagcccggtcgcggagcatc
tggggaggcacgttccactccacggcggcacgtctgctgagacgctacggtcagtcgatt
ggcctgcccgatgactttacgatcatcgatcgcagcgacgccgaagacctgatgagttcc
ctgcggagcgaactcgaattggggaacaacgtggccaagtttccccgcaaagggacgctg
gtggaaatctacagccgctgcgtgaatacctgccttaagctggagccggtgctcgaacga
tattacccctggtgcctggagcacgtggacatactcaaaaagctgtttcaggcgttcgtc
gatcgcaaggagcagcagaacattctcgactatgacgatctgctcctgttctggcacgcg
ctctcctccgatcctgcggggggcaaactgctcagaggccagttcgaagccgtgctggtc
gacgagtaccaggatacgaacgtgctgcagtcgggaattctgaaaaatctctgtcccgat
ggcgagggtctgacggtggtgggcgacgatgcccagtcgatctattcgttccgggcagcg
accgtgcgtaacatcctcgattttccggaagagtatccggggacgacggtcgtcacactg
gaagagaattaccgcagcacgcagccgatcctggcggcgacgaatcagatcatcgacgaa
gcgcatgaacggtatgagaagaaactctggtcgtctaagatcgccggcgaagcgcctttc
atcgtggactgcagcgacaataatgagcaggccgactttgtggtgacgcaggtgttggaa
catctggacgcggggatcccgctgaatcagcaggcggtgctgttccgggcttcgcatcac
agtctcgcgctggaagtcgaactggcccggcggaacattgcctatcataagtacggcggg
ttgaagttcattgaaaccgcgcacgtcaaagacctgatggcgtacctgcgactggcggag
aatccccgtgatgcggtttccggtctgcgggtgctgacactactgccgggcatcggtcag
aaaaaggcgcagcagctgctcaacctgctggcggaatccgggtttcgctttgatgcctgg
tcggagttcaagcctcccgcagcgacggtcgagcactggcctttattcattcggctgatg
aagaatctggcatcgcctcagtccgagaaaaaagggatctcctccgaagtacaccaggtg
cggacgttttacagtccgctgctcgatcagcagtacgacaacgcgccggcccgccagcgg
gacttggaacagctggagcaggtggccagtcggttcagcagccggatgagtttcctggaa
gaaatcacgctcgacccgcccagttcgacgcaggatatcgcgaatgacagcagtaagacg
gatgacgatttcctggtgctgagtacgatccattcgtcaaaagggctggagtgggacgca
gtctatgtcttgcaggccgcagacggcagcatcccctccgagatgtcgctggagagtaat
gacgagatcgatgaagaacgtcgtctgttttacgtggcgctcacgcgggcgaagaactgg
ctctatgtctgtttcccgcaccgtcagtatttccagaaccggcgctggaaccaggcccac
agttatgcccagctgacgcggttcatttcctcgaagactctgcccctgtttcagcgaaga
cccgcgtttaacgccgaggatctggacacgcccgaagaggcgcagatcgaaacgacggcg
gaagacattcgcaagaacattcgcaacatgtggtccagctga
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