Gordonia polyisoprenivorans: GPOL_174p01010
Help
Entry
GPOL_174p01010 CDS
T01719
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GPOL_174p01010 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_174p01010 (recD)
Enzymes [BR:
gpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GPOL_174p01010 (recD)
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GPOL_174p01010 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
SH3_13
RecD_N
AAA_16
UvrD-helicase
TraI_hel_assoc_N
AAA_28
Mg_chelatase
SLFN-g3_helicase
zf-SCNM1
Motif
Other DBs
NCBI-ProteinID:
AFA76120
UniProt:
H6N575
LinkDB
All DBs
Position
p174:100256..102364
Genome browser
AA seq
702 aa
AA seq
DB search
MTPPTPPDTVAPVDDPAGPGAHTDDGRRVHGARGLLGEANAVGILDAADVHVATRLVRMC
GEPVSEIAEFAAALAVRAVRLGSTCLAVRDLADIAAGAEHDSAPERRAIGVGGAVGVGGA
VGADGRAVMPALPSADELVGGLRSSPLVVGAKGGPLRPLVVADTVDGPLIYLRKYFQQEQ
VIRTVLAERAASVPEVSAERVTGALDEVFGEGAGLAPRQRLAAAVAASRWTSVLTGGPGT
GKTYTVARILAVLDRLVPARLHIAVCAPTGRAVAQLQASLDGMSRGLGPDSSVTGDSASG
PPVHAVTVHGLLGWRPGSRPRYGPGNRLPHDVVVVDETSMLSVTAMSHLLEAVRPDARLI
LVGDPHQLASVEAGAVLADLVERPPSGARDSSGATDSSGATDSSGATHSSGADHDSGTAL
DAEIMALADDSRITASERPRLADGIVELTRNFRNRDGIATVAAAVNDGDGDRVLELIGSG
ELADIVLVEPDDPAIHRDVVAWVTDLWSAARAGDAPTALQVLDSHRVLCAHRAGRWGVQG
WTRQIVEWCGEIPGHPPVTPDLAAPQPGMPILVTANDRQNRVFNGDCGVVIAEAGDPSLT
VAFRRSEFSDPMFVPPARLAETMWAYAMTIHRSQGSQFDAVTVVLPPPDSPLLTRELLYT
AITRAKSRVRIVGTPETLRAAVGRRVHRASGLRSSPAEPAGR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcccacaccaccggacaccgtcgccccggtcgacgatcccgccggccccggt
gcccacaccgatgacggcaggcgggtgcacggggcccgcgggctgctcggtgaggccaac
gccgtcggcatcctcgacgccgccgacgtgcacgtcgcgacccgactggtccgcatgtgc
ggggaaccggtgtccgagatcgccgagttcgccgcagcgctggccgtgcgcgcggtgcgc
ctgggctcgacctgcctggcggtccgcgacctggccgacatcgccgcgggcgcagaacac
gactccgcgccggagcgcagggccatcggagtgggcggtgccgtcggggtgggcggtgcc
gtcggggcggacggccgagcggtgatgccggcactgccgtccgccgacgaactcgtcggc
gggttgcgctcgagtccgctggtcgtcggtgccaagggcggccccctgcggccgctggtc
gtcgccgacaccgtcgacgggccattgatatacctgcgcaagtactttcagcaggagcag
gtgatccgcaccgtcctcgccgaacgagccgcgtcggtgcccgaggtctcggccgagcgg
gtcaccggtgccctcgacgaggtcttcggcgagggcgccggccttgcacctcgacagcgg
ctggccgccgccgtcgccgcctcgcggtggacctcggtgctcaccggaggtccgggtacc
ggcaagacctacaccgttgcgcgcatcctcgccgtgctcgatcggctcgtcccggcacgc
ctgcacatcgcggtgtgcgcacccacgggccgcgcggtcgcccagctgcaggcctcactc
gacgggatgagccgcgggctcggcccggactcgtcggtcacgggcgactcggcaagcggc
ccaccggtacacgcggtgaccgttcacggactgttgggctggcgacccggttcgcggccg
cgctatggaccgggtaaccgcttgccgcacgacgtggtggtcgtcgacgagacctccatg
ctgtcggtgaccgcgatgagtcacctcctcgaggcggtgcgtccggatgcgcgcctgatc
ctggtgggtgatccccatcagctcgcgtcggtggaggccggtgcggtgctcgccgacctc
gtcgagcggccacccagcggcgcaagagactccagcggcgcaacagactccagcggcgca
acagactccagcggcgcaacacactccagcggcgcagatcacgacagtgggaccgcactc
gatgccgagatcatggccctggcggacgactcgcggatcaccgcatccgaacgtccgcgt
ttggccgatggcatcgtcgaactgacccgcaacttccgcaaccgcgacggcatcgccacg
gtcgccgcagcggtcaatgacggtgacggcgatcgcgtgctcgagctcatcggctccggc
gagctggccgacatcgtgctcgtcgagcccgacgatcccgcgatccaccgcgacgtcgtc
gcctgggtcaccgatctgtggtcggcagcccgcgccggcgatgcgccgaccgcgttgcag
gtgctcgattcacaccgcgtgttgtgtgcccaccgtgcgggccggtggggtgtgcagggg
tggacgcgtcagatcgtcgagtggtgcggtgagatccccggccacccgcctgtgacgccc
gacctcgcggcgccacagcccgggatgccgatcctggtgaccgccaacgatcggcagaac
cgggtgttcaacggggactgcggtgtggtgatcgccgaggccggcgatccgtcgctgacc
gttgccttccggcgcagcgagttcagcgatccgatgttcgtcccgccggcgcggctggcc
gagacgatgtgggcctacgcgatgaccatccaccgcagccagggcagccagttcgatgcg
gtcaccgtcgttctgccaccgccggattcgccgctgctcacccgggaactcctctatacc
gccatcacccgcgccaagtcgcgggttcggatcgtcggaaccccggagacgttacgggcg
gcggttggtcgtcgcgtgcaccgcgcgagcggactgcgctcctccccggcggagccggcg
ggtcgatga
DBGET
integrated database retrieval system
