Gordonia polyisoprenivorans: GPOL_c00040
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Entry
GPOL_c00040 CDS
T01719
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GPOL_c00040 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c00040 (recF)
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GPOL_c00040 (recF)
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_16
AAA_29
ABC_tran
SbcC_Walker_B
nSTAND3
DUF630
Motif
Other DBs
NCBI-ProteinID:
AFA71083
UniProt:
H6N291
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All DBs
Position
4585..5883
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AA seq
432 aa
AA seq
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MFVRELHLRDFRSWPRVDVELASGPVIITGRNGFGKTNLVEALFYLATLRSHRVSTDAPL
VRSSATSALVTATVENAGRELTASLQINAEGSNKAWLNTAPQRRPRDLLGVLRAVLFAPE
DLLLVRGDPGDRRRFVDELVAQRGPRFAAARSDYDKVLRQRSALLKTAGAAMRRGGSDAD
SVISTLDVWDAQLAALGGQVTAARIDVLGDLEPHFAGSYAAIAPHSRPATLRYRPSVGDE
IVPAAGESADPEAIEAALLTRLGEIRGKEIERGLSLVGPHRDDVDLVLGTDVAKGFASHG
ESWSLALALRLGSVELARAEGVEPVIMLDDVFAELDATRRRKLAEFTEGAEQLIITAAVA
EDVPEGVGGRRIAVNMIEEDGVRHSVVAPAAETPDPDGPDPDGPDPDGPERDVAEPEVSE
TAVSDPPGRLTS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccgtgaactgcatctgcgtgactttcgctcgtggccgcgggtggacgtggag
ttggcgtccggaccggtgatcatcaccggccgcaacggtttcggcaagaccaacctggtc
gaggcgctgttctatctggccaccttgcgatcccaccgggtcagcaccgacgcgccgctg
gtgcgttcgtcggcgacgtcggcgctggtgaccgccaccgtcgagaacgccggccgggaa
ttgaccgcgtccctgcagatcaacgccgaaggttccaacaaggcgtggctcaacaccgca
ccccagcgcaggccgcgcgatcttctgggcgttctgcgcgcggtgttgttcgcccccgag
gatctcctcctcgtacgaggcgatccgggtgaccgtcgacgcttcgtcgatgagcttgtc
gcacaacgtggtccacgattcgccgcggcacgctcagactatgacaaggtgttgcgacaa
cgttcggcgctgttgaagacggccggtgcggccatgcggcgcggtggatccgacgccgac
tcggtgatctcgacactcgatgtctgggacgcccaactcgccgctctcggtgggcaggtg
accgccgcacggatcgacgttctgggtgacctcgaaccgcatttcgccggatcgtatgcg
gcgatcgcgccgcactcgcgaccggcgacgctgcggtatcggcccagtgtcggcgacgag
atcgtgcctgccgcaggagaatccgccgacccggaggccatcgaggcggcgctgttgacc
cggctcggcgagatccgcggcaaggagatcgagcgcgggttgtcgttggtggggccgcac
cgtgacgacgtcgatctcgttctcggtaccgacgtggcgaaaggctttgccagccacggg
gaatcgtggtcgctcgcgctcgcgctgcgactgggatcggtggaactcgccagagccgag
ggcgtcgaaccggtgatcatgctcgacgacgtgttcgccgaactcgacgccacgcgacgt
cgcaaactcgccgaattcaccgaaggtgccgagcagctgatcatcaccgctgccgtcgcc
gaggacgtccccgagggagtcgggggtcggcggatcgcggtgaacatgatcgaagaggac
ggggtccggcactcggtggtcgcgccggcagccgagacgccagaccccgacggcccagac
cccgacggcccagaccccgacggcccagaacgcgatgtcgcagaacctgaggtgtcggag
acggccgtgtcagacccgccggggagactgacgtcatga
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