Gordonia polyisoprenivorans: GPOL_c02150
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Entry
GPOL_c02150 CDS
T01719
Name
(GenBank) putative exonuclease RNase T/DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03030
DNA replication
gpo03430
Mismatch repair
gpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GPOL_c02150
03430 Mismatch repair
GPOL_c02150
03440 Homologous recombination
GPOL_c02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpo03032
]
GPOL_c02150
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c02150
Enzymes [BR:
gpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GPOL_c02150
DNA replication proteins [BR:
gpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GPOL_c02150
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GPOL_c02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
AFA71288
UniProt:
H6MRE3
LinkDB
All DBs
Position
258390..260147
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AA seq
585 aa
AA seq
DB search
MGEWVLVDVETSGTSARRDRVLSLAAMTLDSSGRVQEEYATLLDADCDPGPVHIHHLTRK
RLRGAPTFDATLPHLDRMLAGRTLVAHNASFDHGFLVEEARRFGTTLPISHRLCTVTLAR
RLQLNVPNVKLGTLAAYWGIPQASAHDARDDVKTLAEVFRHCVDLANSLGLGLPIVGCAG
ASRAYPDKVTRVPCPWRDPGRYRSTVGLIQGTKVVITGPTRLPRTELGRRLSDAGLDVMN
SISGRTGLVVANQDAPDSRKLQRAAELGITVVDESTVLRLCSDIVAGVLKSAPESIEVVT
IIDAPSVEPAPATPVRGPWAGRRVLVMGGSHVEATVMRSRIVQLGAAPAINLTAGVTDVL
LLDGGAGDPRMPRVRDRSLTILEMHHIDAALGIGSDPAEKHDDADSSQQEWTPAMMPPGA
VIDLPAGLMTFTVNVAWTAARAKSPEVDVVAFELGDDEKVLSDDEFVFFNQPASPDGALT
LSIDGDCEQGVHVDLQSVPAEVARITIGAAIEEMTFGELGALSVSVDTPNATVVSAVLDA
ATTERSMIIAEIYRRKTQWRLRMLGQGYDDDLGGFAVRHGVDVEE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtgggtcctggtcgatgtcgaaacctccgggacgagtgcacggcgcgaccgg
gtgctcagcctggcggcgatgacgttggactcgtccgggagagtgcaggaagagtacgcg
actctccttgacgcggactgtgatcccggtccggtgcacattcatcacctgactcgcaag
cgcttacgtggcgcaccaacgttcgacgcaactctgccgcatctggatcgcatgctcgcc
gggcgaacgctcgtcgcgcacaatgcctcttttgaccacggattcctcgtcgaagaggca
cgccgattcggtacgacgttgccgatcagtcatcgcttgtgcactgtcacgcttgcgcgg
cgattgcagttgaacgtacccaacgtgaagttggggacgctcgcggcgtactggggtatc
ccacaggcaagcgcccacgatgcgcgcgacgacgtcaagacactggcggaggtctttcgc
cactgcgttgaccttgcgaattccttggggctcggtcttccgatcgttggctgtgcgggc
gcgtctcgtgcctatcccgacaaagtgacgcgcgtgccctgcccctggcgtgatccggga
cgctataggtcgacggtcggtttgattcagggcaccaaggtcgtgatcactggtccaact
cgattgccgcgtacggagttgggtcggcgcctgtcggacgccgggctcgacgtgatgaac
agtatcagtggcaggaccggcctggtcgtggccaaccaggatgcgccggactcgcgaaag
ctccagcgtgcggctgagctgggtatcactgtggtcgacgagagcacggtgttgcgtctt
tgctcggatatcgttgctggagtgctcaaatcggcaccggagtcgatcgaggtcgtgacg
atcatcgatgctccgtcggtcgagccggcgccagcgactcctgtccggggcccatgggcc
ggccgccgggtgctggtgatgggcggtagtcatgtcgaggcgaccgtgatgcgttcgcgg
atcgttcaattgggtgcggcaccggcaatcaatctgaccgcgggggtgaccgacgtactg
ctcctcgacggtggggctggggatccacggatgcccagagttcgtgaccgatcgttgacg
atcctcgagatgcaccacatagacgctgcgctagggatcggcagcgatccggctgagaag
cacgacgacgccgactcatcacaacaggagtggacgcccgcaatgatgcctcctggcgcg
gtgatcgacctccccgccggtctcatgacgttcaccgtgaacgtggcatggacggctgcg
cgagccaagtcgcctgaggtcgacgtcgtcgcctttgaactcggtgacgacgagaaagtg
ttgtccgatgatgagttcgtgttcttcaatcaaccggcgagtcccgatggcgcattgact
ctgtccatcgacggtgactgtgaacaaggtgtccatgtcgacctgcagtccgtgcccgcc
gaggtcgcgcgcatcaccatcggcgccgcgatcgaagagatgacattcggagagctgggt
gctctgtcggtcagtgtcgataccccgaacgccaccgttgtctccgccgtgctggacgct
gcgactactgaacggtcgatgatcatcgcagagatctaccgacgaaagacccagtggcgg
ttgaggatgctcggacaaggctatgacgatgacctcggtggcttcgcggttcgtcacgga
gtggacgtggaagagtag
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