KEGG   Gordonia polyisoprenivorans: GPOL_c03140
Entry
GPOL_c03140       CDS       T01719                                 
Symbol
lysS1
Name
(GenBank) lysyl-tRNA synthetase LysS
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    GPOL_c03140 (lysS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gpo01007]
    GPOL_c03140 (lysS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gpo03016]
    GPOL_c03140 (lysS1)
Enzymes [BR:gpo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     GPOL_c03140 (lysS1)
Amino acid related enzymes [BR:gpo01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   GPOL_c03140 (lysS1)
Transfer RNA biogenesis [BR:gpo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    GPOL_c03140 (lysS1)
 Prokaryotic type
   Other AARSs
    GPOL_c03140 (lysS1)
SSDB
Motif
Pfam: LPG_synthase_C tRNA-synt_2_TM tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d BOF
Other DBs
NCBI-ProteinID: AFA71387
UniProt: H6MSC9
LinkDB
Position
376618..380019
AA seq 1133 aa
MAVETGVQQAPDDEKQHGSVPPDRTAAERRSADLLDQIRHPRGFGHNAPRIAGTVVGVMA
AIALASSVFPFFRHWIHVPRDYVDNYIVAMPETSFAWAYVLALVAIALAARKRIAWWICV
ILLVLFMLTNALLLIPAIGSDLDMTRTERINTGIGLAIQVAILFFLVLTFRQFYTRVRRA
ALLRALGVLITGLVVATMLGWGLVVLVPGSLESGERLPYAFNRVVAFATIDQRTFDGHHT
HPWINGLLGLFGALALIAAAIVLFRSQRLKSLITAEDERLIRALIDRFGDDDSLAYFSTR
RDKAVVFSLDGRAAITYRVELGVGLAGGDPIGDPDSWSGAIAEFLTLCERYGWHPAAMGA
SERGAEAYDAAGFGTLNIGDEAIIHTRDFTLSGPAMKSVRQAVTRNRRAGVTVRIRRHSE
LSDAQMAEAIARADAWRDTDEERGFAMALSRLGDPADGNCLLVEAIQNEGTDDEKVIGLL
SFVPWGRRGVSLDLMRRDRNGVNGVVETMVVELCQRAEQVGVTDISLNFATFRAFFEHGG
QIGAGPVMRASYSALMFGSRFFQMESLYRSNAKYLPDWQPRYLCFEDARMLPRAGLASIV
TEGFVRLPRFGRKEQYEAGEPSVPQGVDVDALVAQFAEEADQQAVSVHRPEQVRVRMAKL
ERLIAEGFDPYPPADAPTHTIAAARELPQGTQVTIAGRITRLRDFGKVIFADLHDWSGQV
QLLIEDSRIIPGTPDFGSDVDLGDLVEVRGMLGESRKGELSVLIDAWRINGKCLRPLPDK
WAGLTDPEARVRQRYLDLATNARSRDLLKTRSVVVKALRDFLATRDFLEVETPILQRIHG
GANATPFQTHINAYNLDLYLRIAPELYLKRLCVGGVEKVYEIGRNFRNEGVDFSHNPEFT
SLEAYEAHSDYLKMLDLTREMIQFAATAAHGEPVIYRTGDDGTVERIDISGDWPVKTVHE
VVSEGAGEEVTPETSAEDLRRICDRLEIAHRPDWDAGALVLELYEHLGEDRTTFPTFYID
FPTSTSPLTRAHRSRAGVAERWDLVAWGVELGTAYTELTDPVEQRKRLTAQSILAADGDP
EAMELDEDFLEALEYAMPPTGGLGVGVDRVVMLITGQSIRESLPFPLVKPDEG
NT seq 3402 nt   +upstreamnt  +downstreamnt
atggcggtcgagaccggagtgcagcaggcccccgacgacgagaagcagcacggatcggtg
ccgccggatcggacagcggccgaacgccgttcggctgatctgctcgaccagatccggcat
ccacggggtttcgggcacaacgcgccgcggatcgccggcaccgtggtgggcgtcatggcg
gcaattgcgttggcgtcgagcgtttttccgttcttccggcattggattcacgttcctcgt
gactacgtcgacaactacatcgtcgcgatgccggagacgagcttcgcttgggcttatgtg
ctggcattggtggcgatcgcactcgccgcccgcaagcgcatcgcctggtggatctgcgtc
atcctgctggtgctgttcatgctcaccaacgcactgctcctgatcccggcgatcggctcc
gatctggacatgacccgcaccgagcggatcaacaccgggatcgggctggcgatacaggtg
gccatcctcttcttcctggttctcacgttccggcagttctacacccgggtccgccgcgcc
gcgttgctgcgtgcgctcggtgtgctgatcaccgggctggttgttgccaccatgctgggc
tggggtctggtggtgctggtacccggcagcctggagtcgggggagcgtctgccgtatgcg
ttcaaccgcgtcgtcgccttcgcgaccatcgatcagcgcaccttcgacggccaccacacc
catccgtggatcaacgggctgctgggactgttcggggctctggccctgatcgccgccgcg
atcgtgctgttccggtctcagcggctcaagtcgctgatcaccgcggaggacgaacgactg
atccgcgcgctcatcgaccggttcggcgacgacgactcgctggcctacttctccacccgc
cgcgacaaggccgtggtgttctcgctcgacggtcgggcggcgatcacctatcgcgtcgaa
ctcggcgtcggactggccggcggtgatccgatcggcgacccggactcctggtcgggggcg
atcgcggagttcctgacgctgtgcgagcggtacggctggcatccggcggcgatgggcgcc
agcgagcgcggcgccgaggcatacgacgcggcgggtttcggcacgctcaacatcggtgac
gaggcgatcatccacacccgcgacttcacgctgtcgggaccggcgatgaagagtgtgcgc
caggcggtcacccgtaatcggcgggccggggtcaccgtacgaatccgacggcacagcgaa
ttgtcggacgcacagatggccgaggcgatcgcccgcgccgacgcgtggcgcgacaccgac
gaggaacgcggcttcgcgatggcactctcgcgactcggcgaccccgccgatggcaactgc
ctgctcgtcgaggcgatccagaacgagggcaccgacgacgagaaggtcatcggcttgctg
tccttcgtcccgtggggtcggcgtggggtctcgctcgacctcatgcgccgcgaccgcaac
ggtgtcaacggcgtggtggagacgatggtcgtcgagctgtgtcagcgtgccgaacaggtc
ggcgtcaccgacatctccctgaatttcgcgacgttccgcgcattcttcgagcacggcggg
cagatcggtgccggaccggtgatgcgggcgagttactcggcgttgatgttcggctcccgg
ttcttccagatggagtcgctctatcgctccaacgcgaagtacctgccggattggcagccg
cggtacctgtgcttcgaggacgcccggatgctcccgcgtgccgggctggcgagcatcgtc
accgagggtttcgtgcggctgccgcgcttcggccgcaaggaacagtacgaagccggcgag
ccgtcggtaccgcagggagtcgacgtcgacgcgctcgtcgcgcagttcgccgaggaagcc
gatcagcaggcggtctccgtgcatcggcccgagcaggtccgggtgcggatggccaagctc
gaacggctcatcgccgagggcttcgacccgtacccgcctgccgacgcgcccacccacacc
atcgccgcggcccgggaactaccgcagggcacccaggtcaccatcgccggccgcatcacc
cggttgcgtgacttcggcaaagtgatcttcgccgacctccacgactggtcggggcaggtg
cagttgctcatcgaggattcccggatcatcccgggcacaccggatttcggctccgatgtg
gacctcggtgatctcgtcgaggtgcgtggcatgctcggcgagagccgcaagggcgagttg
tcggtgctgatcgacgcgtggcggatcaacggcaaatgcctgcgtccgctgcccgacaag
tgggccggtctgaccgacccggaagcccgtgtgcgccaacgctatctggacctcgcgacc
aacgcccgcagccgggacctgctcaagacccgcagcgtcgtcgtcaaagcgctgcgcgac
ttcctcgccacccgggatttcctggaggtggagacgccgatcctgcagcgaatccacggc
ggcgccaacgccaccccgttccagacgcacatcaacgcctacaacctcgacctctatctg
cgtatcgcacccgagctgtacctcaagcggctctgcgtcggcggggtggagaaggtctac
gagatcgggcggaacttccgcaacgagggcgtcgacttcagccacaaccccgagttcacc
agcctcgaagcctatgaggcgcacagtgattacctgaagatgctggatctgacccgcgag
atgatccagttcgccgcgaccgcggcgcacggtgagccggtgatctaccggaccggtgac
gacggcaccgtcgagcgcatcgacatctccggtgactggccggtcaagaccgtgcacgag
gtggtctccgagggtgccggtgaggaggtcacgccggagacgagcgccgaggacctgcgt
cggatctgtgatcggctggagatcgcacaccgccccgactgggacgcgggggcgctggtg
ctcgaactgtatgagcacctcggtgaggaccgcacgacgttcccgacgttctacatcgac
ttccccacgtcgacctcgccgctcacccgtgcccaccgcagccgcgcgggtgtcgccgaa
cggtgggatctcgtcgcctggggcgtcgagctcggcaccgcctacaccgagctcaccgat
ccggtcgaacaacgcaaacggctgacggcgcaatcgatcctggccgccgacggtgatccg
gaggcgatggaactcgacgaggacttcctcgaggcactcgaatacgcgatgccgcccacc
ggcggactcggcgtcggcgtcgaccgcgtcgtcatgctgatcaccggtcagtcgatccgc
gaatcgctgccgttcccgttggtcaagcccgacgagggataa

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