Gordonia polyisoprenivorans: GPOL_c06090
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Entry
GPOL_c06090 CDS
T01719
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GPOL_c06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c06090
Enzymes [BR:
gpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GPOL_c06090
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GPOL_c06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFA71678
UniProt:
H6MVY3
LinkDB
All DBs
Position
complement(728736..729506)
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AA seq
256 aa
AA seq
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MRIGAHLREDDDPLTTATDLGVDVFQMFVTDPQKWKKPVPRPDAQAFRDSPIDVVVHSSY
QINVASLNNRLRMPSRKAVEEQAAAASDLGAFGLVVHGGHLRDGEDSAEGFANWRKLFDR
QVDKGGFGVPILIENTAGGDHAMARTLEAIDRLWEAVGDFEQAGFCLDTCHAWAGGEDLV
GLVERVREITGRIDLVHLNNSRDEFDSGRDRHANLGSGHIDPEVLVAVAAAADAPIILET
PAEGIPDDLEYLRSAL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggagctcacttgcgggaggatgacgacccgctgaccaccgcgacggacctc
ggcgtcgacgtcttccagatgttcgtcaccgaccctcagaagtggaagaagccggtcccc
cgcccggacgcgcaggctttccgcgactccccgatcgacgtcgtcgtccactcgagttac
cagatcaatgtggccagcctgaacaaccggctccgcatgccctcccgcaaggccgtcgag
gagcaggctgccgctgcttccgacctcggcgcgttcggtctcgtcgtccacggcggccac
ctgcgcgacggggaggattcagcggaagggtttgccaactggcgcaagctgttcgaccgt
caggtcgacaagggcggcttcggggtcccgattctcatcgagaacaccgcaggcggcgac
catgcgatggcccgaaccctcgaggccattgatcgactctgggaggcggtcggcgatttc
gagcaggccggcttctgtctcgacacctgtcacgcgtgggcgggcggcgaggatctcgtc
ggactcgtcgagcgggtccgggagatcaccgggcgtatcgatctggtgcacctcaacaac
tcccgcgacgagttcgactccggccgcgaccgtcatgcgaatctggggtcgggacacatc
gacccagaggtgctcgtcgccgtcgcggcagcggccgacgcacccatcatcctcgagacg
ccggccgaaggaatccccgacgatctcgaatacctgcggtcggcgttgtag
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