Gordonia polyisoprenivorans: GPOL_c17810
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Entry
GPOL_c17810 CDS
T01719
Name
(GenBank) putative nuclease SbcCD, subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c17810
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GPOL_c17810
Archaeal homologous recombinant proteins
GPOL_c17810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AFA72830
UniProt:
H6MVC3
LinkDB
All DBs
Position
2021999..2023240
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AA seq
413 aa
AA seq
DB search
MRILHTSDWHLGRTFHGVELLSDQRRMLADIAAIVAAESVDVVVVAGDVYDRSVPSADAV
SVYDAGLGDIAAAGAQIVVTSGNHDSPTRLGAASAFAAAGGLHLRTSVAAIDTPVLLDDE
FGPVAFYGIPYLEPDAVRKAFDIDAPCGHQGVLGAAMDRVRADATARGARTVVAAHAFVS
GAVSTGSERSISVGGVETVAADTFSGIDYVALGHLHSPQEITPAVRYSGSPMPYSFGENS
HRKGVWLVDLDADGVTDVRLHELPALRGLSSLRGTLDELLGDEKYADAHEHYIEATLTDT
IRPLDAMRRLRERFPYAVHVHWERPEALGRLDYRSRIRGRTDAQIIAAFVGDVRDEPSAA
ERDLIERALREVVGEPEVVEAGAAEVGAADIEAIEADQGQWALFALDTEPKSA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctgcacacctcggactggcacctcggccggacgttccacggtgtcgagctc
ctctccgatcaacgtcggatgctcgccgacatcgctgcgatcgtcgccgccgagtcggtc
gacgtcgtcgtggtggcgggcgatgtgtacgaccgttcggttccctcggcggatgcggtg
tccgtctacgacgccggcctgggtgacatcgccgcagccggggcgcagatcgtcgtcacc
tccggcaaccacgattcaccgacccgactcggtgccgcatcggcattcgcggccgcgggc
ggactgcacctgcgcacgagtgtggctgccatcgacacaccggtcctgctcgacgacgag
ttcggcccggtggcgttctacgggattccctacctcgaacccgacgccgtccgaaaggct
ttcgacatcgatgccccgtgcggtcatcagggcgtcctgggcgcggcaatggaccgggtg
cgcgccgacgccaccgcacgcggcgcgcgtaccgtcgtcgccgcccacgcgttcgtcagc
ggggccgtcagtaccggatcggagcggtccatcagtgtcggtggggtggaaacggttgcc
gccgatacgttctcagggatcgattacgttgcgctcggtcacctgcactcaccgcaggag
atcaccccggcggtgcgctacagcggctcgccgatgccgtactcctttggtgagaacagt
catcgcaagggcgtgtggctcgtcgatctcgatgccgacggcgtgaccgacgttcgcctg
cacgagctgcccgccctgcgtgggttgtcctccctgcgaggcactctcgatgagctcctc
ggtgacgagaagtacgccgacgcgcatgagcactacatcgaggcgacgctcaccgacacc
atccggccgctcgacgcgatgcgccgactgcgcgagcgattcccctacgcggtgcacgtg
cactgggagcgaccggaggccctcggtcgtctcgattaccggtcgcgcatacgcggacgc
accgacgcacagatcatcgctgccttcgtcggtgacgtccgtgacgagccgtccgcggcc
gagcgggacctgatcgagcgtgcgctgcgtgaggtcgtcggcgaaccggaagtggtcgag
gccggtgctgccgaggtcggtgctgctgacatcgaggccatcgaggccgatcaagggcag
tgggcgctgttcgccctcgacaccgaaccgaagtcggcgtga
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