Gordonia polyisoprenivorans: GPOL_c19100
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Entry
GPOL_c19100 CDS
T01719
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c19100
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GPOL_c19100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_22
ResIII
DUF5852
AAA_30
AAA_16
T2SSE
AAA
Zeta_toxin
AAA_19
AAA_7
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AFA72952
UniProt:
H6MX30
LinkDB
All DBs
Position
2171621..2173189
Genome browser
AA seq
522 aa
AA seq
DB search
MTDPAQSAASIAAGYAFSGAALELGTVSVDGTVVSDAHVRIPLSMMNRHGLVAGATGTGK
TKTLQLIAEQLSANGVPVVMADIKGDLSGLSNPGSANEKITARAAQTGDDWQPSGCPVEF
TSLGSTGIGVPVRATITSFGPILLSKVLGLNDTQESVLGLIFHWADGKGLPLLDLKDLRA
VIAYLTSDEGKPELKAIGGVSTQTAGVILRALSNLEADGGDTFFGEPEIEPADLLRTAPD
GRGIVTLFELGAQAARPALFSTFLMWILADLFEFLPEVGDLDKPKLVFIFDESHLLFDDA
SKAFKDQVVQTVKLIRSKGVGVFFCSQLPTDIPNEVLSQLGARIQHALRAFTPDDQKALT
KTVKTYPVSDVYKLDQALTSLGTGEAIVTVLSEKGAPTPVAWTVIRAPRSSMDAVGAEGI
TAAAKTSPLYAKYGQSIDRESAYEKLTAKTLAPGESPDAPAPVPAPAPSPAPAPVPAPQP
EEPGILTEVLTSKPMQSFLRSAATAAGREFSRAIFGTGRRRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcccgcccagtccgccgcatccatcgccgcaggttatgcgttttccggcgca
gcgctcgaactaggaacggtcagcgtcgacggcaccgtcgtcagtgacgcgcacgtgcgt
atcccgctgtcgatgatgaaccgccacggattggtcgccggcgccaccgggaccggtaag
accaagacgttgcagctgatcgccgagcaactgtcggccaacggggtgccggtggtgatg
gccgacatcaagggcgacctctccggactgagcaatccgggtagcgccaacgagaagatc
accgcccgcgccgcgcaaaccggcgacgactggcagccgtcgggttgtccggtcgaattc
acctcgctcggctcgaccgggatcggggtcccggtgcgtgccaccatcacctccttcggc
ccgatcctgctgagcaaggtgctcggactcaacgacacccaggagtcggtgctgggcttg
atcttccactgggccgacggcaagggtctgccgctgctcgatctgaaggacctgcgcgcg
gtgatcgcctatctgaccagcgacgagggcaagccggagctgaaagccatcggcggggtg
tccacgcagaccgcgggcgtcatcctgcgcgccctgagcaacctcgaagccgacggcggg
gacacctttttcggcgaacccgaaatcgagccggccgatctgctgcgcaccgcaccggac
ggtcgcgggatcgtgaccctgttcgaactcggcgcccaggccgcccgcccggccttgttc
tcgaccttcctgatgtggatcctcgccgatctcttcgaattcctgcccgaggtcggcgat
ctggacaaaccgaagctcgtcttcatcttcgacgagtcccatctgctgttcgacgatgcc
tccaaggcgttcaaggatcaggtggtgcagacggtgaaactcatccgttccaagggcgtc
ggcgtcttcttctgctcgcagctgcccaccgacatccccaacgaggtgctctcacagctc
ggtgcgcgcatacaacatgcgttgcgcgcgttcacccccgacgatcagaaggcactgacc
aagacggtcaagacctatccggtctcggacgtgtacaagctcgatcaggccctgacgtcg
ctcggtaccggtgaggcgatcgtcaccgtcctgtccgagaagggtgcacccacaccggtc
gcctggaccgtcatccgcgcgccgcgctcgtcgatggatgccgttggtgccgaaggcatc
acggccgcggccaagacgagtccgctgtacgccaagtacggtcaatcgatcgatcgtgaa
tccgcctacgagaaactgaccgccaagacgctcgcgccgggtgaatcgccggatgccccg
gcgccggtgcctgccccggcaccctcgcccgctccggcgccggtgccggctccgcagccg
gaggagccgggcatcctcaccgaggtgctgaccagcaagccgatgcagagtttcttgcga
tccgcggccaccgcggccggccgcgagttcagtcgtgcgatcttcggtaccgggcggcgt
cggcgatag
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