Gordonia polyisoprenivorans: GPOL_c20570
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Entry
GPOL_c20570 CDS
T01719
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpo03016
]
GPOL_c20570 (truB)
Enzymes [BR:
gpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GPOL_c20570 (truB)
Transfer RNA biogenesis [BR:
gpo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GPOL_c20570 (truB)
Prokaryotic type
GPOL_c20570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFA73096
UniProt:
H6MYV5
LinkDB
All DBs
Position
2332705..2333622
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AA seq
305 aa
AA seq
DB search
MADASIENAGLVIVDKAAGITSHDVVSRCRKIFNTRRVGHAGTLDPMATGVLVIGVERAT
KLLGLLSLTTKSYTATIRLGAATDTDDREGRIISRGAVSAICDDEITRAVADLTGDISQV
PAKVSAIKVDGRRAHALARTGAEFDLAARPVRVSRFEIRAIRRPGDDGGESGFLDLDVEV
DCSAGTYIRSLARDLGDALGSGGHLTALRRTAVGPFTLDHARTLDVLAETPELSLTIDQA
ALLSFPRRDIDDDEAESISQGRWLVPLGLKGIHVGVDPRGQAIALIEEKGRRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcctccatcgagaacgccggcctcgtcatcgtcgacaaggcggccggcatc
accagccacgacgtggtctcgcggtgccgcaagatcttcaacacgcgccgcgtcggacac
gcaggcactctggacccgatggcgaccggcgttctcgtcatcggcgtggaacgggccacc
aaactcctgggactgttgtcgctgaccaccaagtcgtacacggcgacgatccgtctcggg
gcggccaccgacaccgatgaccgcgagggtcggatcatcagtcgcggggcggtgtcggcg
atctgcgatgacgagatcacccgtgcggtcgccgatctcaccggcgacatctcgcaggtc
ccggccaaggtcagtgcgatcaaggtcgacgggcgacgcgcgcatgcgttggcccgcaca
ggtgccgagttcgatctcgccgcgcgtccggtgagggtctcacgattcgagatcagggcg
atccggcgtcccggggacgacggcggcgagtccggcttcctcgatctcgacgtcgaggtc
gactgttcggccggcacctacatccgttccctggcacgtgatctcggcgatgccctcgga
tccggcggtcatctgaccgctctacggcgcaccgcggtggggccgttcaccctcgaccat
gcccgaaccctcgacgtcctcgccgagacccccgagttgtcactgacgatcgaccaggcg
gcactgttgtcgttcccacgtcgcgacatcgacgacgacgaagccgagtcgatcagtcag
ggacggtggctcgttccgttgggtctcaaaggaattcacgtcggcgtcgatccacgcggg
caggccatcgcactgatcgaggagaagggcaggcgcgccagctcggtgatggtggtacga
ccggcgacgctgcgctga
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