Gordonia polyisoprenivorans: GPOL_c21970
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Entry
GPOL_c21970 CDS
T01719
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo00750
Vitamin B6 metabolism
gpo01100
Metabolic pathways
gpo01240
Biosynthesis of cofactors
Module
gpo_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GPOL_c21970 (pdxS)
Enzymes [BR:
gpo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GPOL_c21970 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
DHO_dh
Glu_synthase
FMN_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
AFA73229
UniProt:
H6MZX8
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All DBs
Position
2482881..2483729
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AA seq
282 aa
AA seq
DB search
MAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIIA
AVSIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYANHIDKWAFTVPFVCGATNL
GEALRRITEGAAMIRSKGEAGTGDVSNATTHMRRIRDEIRRLTSLPKDELYVAAKELQAP
YELVVEVAQAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPAQRAAAIV
QATTFHDDPDVLAKVSRGLGEAMVGINVDDIPAPHRLAERGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgctcaagggcggggtgatcatggacgtggtcacccccgatcaggccaag
atcgccgaggatgccggcgcggtcgcggtgatggcgctcgagcgtgtgcccgccgacatc
cgcgcccagggtggcgtctcgcggatgagtgatccggacatgatcgacggcatcatcgcc
gcggtctcgatccccgtgatggccaaggcccgtatcggtcatttcgtcgaggcccagatc
ctgcagagcctcggcgtcgactacgtcgacgagtcggaggtgctgaccccggccgactac
gccaaccacatcgacaagtgggcgttcacggtgccgttcgtctgcggtgccaccaatctc
ggcgaggcgctgcgtcgtatcaccgagggagcggcgatgatccggtccaagggtgaagcc
gggaccggtgacgtctcgaacgcgacgacgcacatgcgcaggatccgcgacgagatccgc
aggctcacctcgctgccgaaagatgagctgtacgtggccgccaaggagctgcaggcgccc
tacgagctggtcgtcgaggtggcgcaggcgggcaagttgcccgtcacgttgttcaccgcc
ggtggcatcgcgaccccggcggatgcggcgatgatgatgcaactcggcgccgagggcgtg
ttcgtcggatcgggcatcttcaagtccggtaacccggcgcagcgagcggccgcgatcgtg
caggcgacgactttccacgacgacccagacgtgctggcgaaggtctcgcgcggactcggt
gaggcgatggtcgggatcaacgtcgacgacatcccggcgccgcaccgcctcgccgaacga
ggttggtga
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