Gordonia polyisoprenivorans: GPOL_c23990
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Entry
GPOL_c23990 CDS
T01719
Symbol
pafA
Name
(GenBank) Pup--protein ligase PafA
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gpo03051
]
GPOL_c23990 (pafA)
Enzymes [BR:
gpo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
GPOL_c23990 (pafA)
Proteasome [BR:
gpo03051
]
Prokaryotic proteasome
Bacterial regulatory particles
GPOL_c23990 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AFA73428
UniProt:
H6N2K3
LinkDB
All DBs
Position
2738320..2739678
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDGLVQLINHDRAGELVLEDLLIDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLATPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAEMTTLLKVGSAALVLEMIEAGVVF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHLVNRRPDPEMD
MVVDLWGRMLDAVESGDFSGVDTEIDWVIKRKLFERYQDRYSMDLSDPKIAQLDLAFHDI
KRGRGVFDVLSRKGLVRRITTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgaatcatgggcatcgagacggaattcggtgtcacgtgcaccttccacggt
catcgtcggctcagtccggacgaggtggcccgctatctgttccggcgggttgtctcgtgg
ggccggtcgtcgaatgtgttcctgcagaacggcgcgcggctctacctcgacgtcgggtcg
catccggagtacgcgaccgccgaatgcgacggtctggtccagctgatcaaccacgaccgg
gcgggtgaactcgtcctcgaggatctgctgatcgacgccgagcagcgcctggccgacgag
ggcatcggtggtgacatctacctgttcaagaacaacaccgattcggccggcaactcctac
ggatgccacgagaactatctggtggtgcgggcgggcgagttctcccgcatctccgatgtg
ctgttgccgttcctggtgacccggcagctgatctgcggcgcggggaaggtgctggccacc
ccgaaggcggcgaccttctgtctgtcgcagcgcgccgagcacatctgggagggtgtgtcg
tcggcgaccacgcgctcccgcccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccggcggctgcacgtcatcgtcggcgattccaacatggcggagatgacgacg
ctgctcaaggtcggctcggcggcattggtgctggagatgatcgaggccggcgtggtgttc
cgggatttcgccctggacaacccgattcgtgccatccgcgaggtcagccatgaccccacg
gggcgtcgcccggtccggctcgccggtggtcggcaggccagcgccctggacatccagcgc
gagtatcacgcgcgcgccgtcgaacacctggtgaaccggcgcccggatccggagatggac
atggtcgtcgatctgtggggccggatgctcgacgcggtggagagcggcgacttctccggg
gtggacaccgagatcgactgggtgatcaagcgcaagctgttcgagcgctaccaggaccgg
tactcgatggatctgtccgacccgaagatcgcgcaactcgacctggccttccacgacatc
aaacgcggtcgcggtgtcttcgacgtcctgtcccgcaagggtctggtccgccggatcacc
accgacgaggcgatcaagaccgcggtgaacgaaccgccgcagaccacccgggccaaactg
cgtggcgacttcatctccgcggcgcagaaggcgggtcgcgatttcaccgtcgactgggtc
cacctcaaactgaacgatcaggcgcaacgaacggtgctgtgcaaggacccgttccggtcg
gtcgacgagcgcgtcgatcgcctgatcgcgtccatgtga
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