Gordonia polyisoprenivorans: GPOL_c24340
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Entry
GPOL_c24340 CDS
T01719
Symbol
lcfB1
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo00061
Fatty acid biosynthesis
gpo00071
Fatty acid degradation
gpo01100
Metabolic pathways
gpo01212
Fatty acid metabolism
gpo02024
Quorum sensing
gpo04146
Peroxisome
Module
gpo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GPOL_c24340 (lcfB1)
00071 Fatty acid degradation
GPOL_c24340 (lcfB1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GPOL_c24340 (lcfB1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GPOL_c24340 (lcfB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpo01004
]
GPOL_c24340 (lcfB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpo04147
]
GPOL_c24340 (lcfB1)
Enzymes [BR:
gpo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GPOL_c24340 (lcfB1)
Lipid biosynthesis proteins [BR:
gpo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GPOL_c24340 (lcfB1)
Exosome [BR:
gpo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GPOL_c24340 (lcfB1)
Exosomal proteins of breast cancer cells
GPOL_c24340 (lcfB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFA73463
UniProt:
H6N2N8
LinkDB
All DBs
Position
complement(2778131..2779603)
Genome browser
AA seq
490 aa
AA seq
DB search
MISSSFFAWDLRERGDAPCVADDTVDLTYRGFADRVDACAQKLQRLGVRHGDVVATVLPN
RAELLVVLMAAWRLRAVATPVNPTFTADEMQYQFADSGAAVVVSDAADLRADRPVLHVDD
LSPAPTTGWRAPTEPADADDALLIYTSGSTGRPKGVRLTHANLRYMATAMAHHLELDADD
HALLILPLFHVNAICVSFLAPILAGGRLSITGRFSVSRFFDDVERLRPTYFSAVPTIYAL
LVSHPDLERRARTLDSLRFAICGAAPISAELLDRVENSLRIPILEGYGLTEGTCASTCNP
RHGVRKLGTVGPAIEGQRIHVVGADGADLPTGDVGEVVITGPNVMRGYLNRPEDTAKTVG
EGRLHTGDVGRLDADGYLTIVDRIKDLIIRGGENLYPKEIENALATHPGVLECAVVGAPH
PVYGEIPIAFVVTYPDHTIDDDDLTRHLGSLVTRAKIPESIHIVEALPRNPVGKIDKPAL
RRQFATPTAL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagttcctcgttcttcgcctgggatctccgcgagcgtggcgacgctccgtgcgtc
gccgatgacaccgtcgacctcacctaccgcggcttcgccgaccgggtcgatgcatgtgcc
cagaagctgcagcgacttggcgtccggcatggtgacgtcgtggcgacggtcctgccgaac
cgtgccgaactgctcgtcgtcctgatggccgcgtggcgtctgcgcgcggtggcgaccccg
gtcaaccccacgttcaccgctgacgagatgcagtatcagttcgcggattccggcgcggcg
gtcgtcgtgtccgacgccgcggatctgcgggccgaccggcccgtgctccacgtcgacgac
ctgtctccggcccccaccacggggtggcgggcgccgaccgagcccgccgacgccgacgat
gccttgctgatctatacctccggatcgacgggacgtcccaagggagttcggctgacccac
gcgaacctgcgctacatggccacggcaatggcacaccacctcgagctcgacgccgacgat
cacgcattactgatcctgccgctgttccacgtgaacgcgatctgcgtgagcttcctggcg
ccgatcctggccggcggacgactcagcatcaccggacggttctcggtctcgaggttcttc
gacgacgtcgaacgtctacgacccacctacttctcggccgtaccgaccatctatgcactg
ctggtctcccatcccgacctcgagcgtcgggctcggacgctcgactccctgcgtttcgcg
atctgcggcgccgcaccgatttccgcagaacttctcgatcgcgtcgagaacagcctgcgg
ataccgattctcgagggctacggactcaccgagggcacctgcgcatcgacgtgcaacccg
cgtcacggggtacgcaagctcggcaccgtggggccggccatcgagggccagcgcatccat
gtggtcggagccgacggcgcggacctacccaccggtgacgtcggtgaggtggtcatcacc
ggacccaatgtgatgcgcggttacctcaatcgtcccgaggacaccgcgaagaccgtcggc
gagggtcggctgcacaccggcgacgtcggccgactcgatgccgatggttatctgacgatt
gtcgaccgcatcaaggacttgatcatccgcggcggagaaaacctgtaccccaaggaaatc
gagaacgccctcgcgacccacccgggagtcctcgagtgcgcggtcgtcggcgcaccccat
ccggtgtacggagagatcccgatcgccttcgtcgtcacctaccccgaccacaccatcgac
gacgacgacctcacgcggcatctcggctcgctggtgacgagggccaagatccccgagtcg
atccacatcgtcgaggccctcccccgaaacccggtgggcaagatcgacaaaccagctctc
cgccggcaattcgcaacgccgacagcgttgtag
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