KEGG   Gordonia polyisoprenivorans: GPOL_c26230
Entry
GPOL_c26230       CDS       T01719                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GPOL_c26230 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpo03400]
    GPOL_c26230 (uvrA)
DNA repair and recombination proteins [BR:gpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GPOL_c26230 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GPOL_c26230 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_21 AAA_25 AAA_16 nSTAND1 AAA_22 ScfRs NACHT DnaJ_CXXCXGXG Viral_helicase1 cobW NTPase_1 FtsK_SpoIIIE DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AFA73645
UniProt: H6MQU8
LinkDB
Position
complement(2975292..2978171)
AA seq 959 aa
MVDRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGKAH
CPVCGAEIAKQTPQQIVDQVLEMGEGTRFQVLAPVVRTRKGEFVDLFAELQTQGFSRARI
DGKVHPLAEPPKLKKQEKHDIEVVVDRLVVKSSAKQRLTDSVETALRLADGIVVLDFVDL
EADDPHRERRFSERMACPNGHPIAIDDLEPRSFSFNSPYGACPECDGLGVRKEIDEDLVV
PDPDLALSEGAIAPWSSGHNADYFLRLMGGLADQMGFDVDTPWKKLPAKARNALLNGSDH
QVHVKFRNRYGRTRSYYTEFEGVMAFLSRRMDQTESEQMKERYEGYMRDVPCPACGGARL
RPEILSVTLDHPTDGPRSIAQVCELSISECATYLDGLSLDARQKAIAGRVLKEVQARIRF
LLDVGLEYLSLERAAGSLSGGEAQRIRLATQIGAGLAGVLYVLDEPSIGLHQRDNRRLID
TLTRLRDLGNTLIVVEHDEDTIRAADWIVDIGPRAGEHGGEVVHSGSYKELLKNRKSLTG
NYLAGRDTLPVPAIRRPITKNRHITVVGAREHNLQGIDVTFPLGVLTAVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLGNLDKLVQVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGEGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTISEVLDMPIEEAAEFFEPVTSIHRYLKTLVEVGLGYVRLGQPAPTL
SGGEAQRVKLSAELQKRSSGRTVYILDEPTTGLHFEDIKKLLAVINGLVDKGNTVIVIEH
NLDVIKTADWVIDMGPEGGTGGGMVVAEGTPEEIADTPESHTGKFLAEILDDERVASAG
NT seq 2880 nt   +upstreamnt  +downstreamnt
gtggttgatcgcctgatcgtccgcggagcccgtgagcacaacctgcgcggaatcgacgtg
gacctgccgcgtgacagtctgatcgtcttcaccggtctgtccgggtcggggaagtcctcg
ctggccttcgacacgatcttcgccgagggccagcgccgctacgttgagtcgctctcggcg
tacgcgcgtcagttcctcggccagatggacaaacccgatgtcgacttcatcgagggcttg
tccccggcggtctcgatcgatcagaagtcgaccaaccgcaatccgcggtcgacggtcggc
acgatcaccgaggtgtacgactacctgcgactgctctacgcgcgcgccggtaaggcacac
tgcccggtgtgtggcgcggagatcgccaaacagacaccgcagcagatcgtcgaccaggtc
ctcgagatgggcgagggcacccggttccaggtgttggcgccggtcgtccgcacccgaaag
ggcgagttcgtcgacctgttcgccgaactccagacgcagggcttctctcgtgcgcggatc
gacggcaaggtccatccattggcggagccgccgaaactcaagaagcaggagaagcacgac
atcgaggtcgtcgtggaccgcctggtggtcaagagcagtgccaagcagcgattgaccgac
tccgtggagacggcgctgcgcctggccgacggcatcgtggtgctcgacttcgtcgacctc
gaggccgacgatccgcaccgcgagcgacgcttctccgagcggatggcctgcccgaacggg
caccccatcgcgatcgacgatctcgaaccccgatcgttctcgttcaactccccgtacgga
gcatgtcccgaatgcgacggtctcggtgtccgcaaggagatcgacgaggatctcgtcgtg
cccgacccggacctcgcattgtcggagggcgcgatcgcgccgtggtcgtcgggacacaat
gcggactacttcctgcgcctgatgggcggcctggccgatcagatgggtttcgacgtcgac
accccgtggaagaagttgcccgccaaggcgcgcaacgcgctgctcaacggcagtgatcat
caggttcacgtcaagttccgcaaccgttacggccgcacgcgctcgtactacaccgagttc
gagggcgtgatggccttcctcagtaggcggatggatcaaaccgagtccgagcagatgaag
gagcgttacgaggggtacatgcgcgacgtgccgtgccccgcgtgtggtggggcccgcctg
cgaccggagatcctgtcggtgaccctcgaccatccgaccgacgggccccgatcgatcgcg
caggtctgcgaactctcgatctccgaatgtgcgacgtacctcgacggtctgtccctcgat
gcccggcagaaggcgatcgccggccgtgttctcaaagaagtacaggctcgtatccggttc
ctgctcgacgtgggtttggagtacctgtcgctcgaacgcgcggccgggtcattgtccggt
ggcgaagcacaacgcatccgcctggccacccagatcggtgcagggcttgccggggtgctc
tacgtcctcgacgagccgtcgatcgggctgcaccagcgcgacaaccgacgactcatcgac
acgctgacgcggctgcgcgatctcggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgcgcggccgactggatcgtcgacatcggcccccgggccggtgagcacggtggt
gaggtcgtgcactcgggcagctacaaggaactgctcaagaaccggaagtcgttgacgggc
aactatcttgccggccgcgacacccttccggtgccggcgatccgacggccgatcaccaag
aaccggcacatcacggtggtcggggcgcgcgaacacaatctgcagggcatcgatgtgacg
ttcccgctcggtgtgctcaccgccgtgacgggagtgtccgggtcggggaaatcgaccctg
gtcaacgacatcctcgccacggtcctcgccaacaagctcaacggcgcccgacaggtcccg
ggccggcacacgcgggtcaacgggttgggaaatctcgacaagctcgttcaggtggaccag
tcgccgatcgggcgcaccccgcgttccaacccggcgacctacaccggcgtcttcgacaag
atccgaaccctgttcgcagccaccaccgaggccaaggtgcgcggctatcagccgggtcgg
ttctcgttcaacgtcaagggaggccggtgcgaggcgtgcaccggtgagggcacgatcaag
atcgagatgaacttcctgccggatgtctacgtgccgtgcgaggtgtgccatggggcgcgg
tacaaccgcgaaacactcgaggtccactacaagggcaagaccatctcggaggtcctcgac
atgccgatcgaggaggccgccgagttcttcgagccggtgacctccattcaccgctacctc
aagacgctggtcgaggtcgggctcggttacgtccggctcgggcagccggcgccgaccctg
tccggtggcgaggcacaacgcgtgaagctctccgccgaactccagaagcggtcgtcggga
cggacggtctacattctcgacgagccgaccaccggcctgcacttcgaggacatcaagaaa
ctgctcgcggtgatcaacggattggtcgacaagggcaacaccgtgatcgtcatcgagcac
aaccttgacgtgatcaagaccgccgactgggtgatcgacatggggcccgagggtggaacc
gggggcggaatggtcgtcgcggagggcactccggaggagatcgccgacacccccgaaagc
cacaccggcaagttcctcgccgagatcctcgacgacgaacgggtcgcctcggccggctga

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