Gordonia polyisoprenivorans: GPOL_c26480
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Entry
GPOL_c26480 CDS
T01719
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03030
DNA replication
gpo03410
Base excision repair
gpo03420
Nucleotide excision repair
gpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GPOL_c26480 (polA)
03410 Base excision repair
GPOL_c26480 (polA)
03420 Nucleotide excision repair
GPOL_c26480 (polA)
03440 Homologous recombination
GPOL_c26480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpo03032
]
GPOL_c26480 (polA)
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c26480 (polA)
Enzymes [BR:
gpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GPOL_c26480 (polA)
DNA replication proteins [BR:
gpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GPOL_c26480 (polA)
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GPOL_c26480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GPOL_c26480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFA73670
UniProt:
H6MQX3
LinkDB
All DBs
Position
complement(3003934..3006726)
Genome browser
AA seq
930 aa
AA seq
DB search
MVAGGEGLSGVATRLVRVSPAQSSTATRGKTKASTQPTLMLLDGHSLAYRAFFALPAENF
KTETGQHTNAVYGFTSMLINLLRDEEPTHIAAAFDVSRKTFRSEMYPEYKAQRSKSPDEF
NGQVDVTKEVLDALGIQVFAIDGYEADDIIATLATQAEAQGFKVLVVTGDRDSLQLVDDS
VTVLYPRKGVSDLTRFTPEEVEKKYGLTPSQYPDYAALRGDPSDNLPGIPGVGEKTASKW
IREYGSLASLVDHVDQVKGKVGDALRANLASVQTNRQLTELIRDMQLPAGPDDLARVGWD
RDRIHQLFDDLEFRVLRDRLFSTLSSVEPEAEAGFDLDGSVLAAGQITGWLADHARTGRT
GLTVTAPHTVVGADITGIALAAADGVSAYVDITQLDPADEKALGGWLADPDTPKALHETK
SAIHALRSRGWTLRGVTSDTALAAYLVRPGQRSFNLDDLALRYLRRELRADDGAGNDQLS
LLDEDGGLAQQAEQHMLEARAVAELADTLDTELDRIDSRPLLTDMELPLLFVLSDLEAAG
IAVDVDHFGTLEEGFSERIRAAAEAAYEVIGEQINLGSPKQLQTVLFDKLEMPKTKKTKT
GYTTDADALQTLYEKTEHPFLAHLLEHRDATRLKVTVDGLLKSVADDGRIHTTFNQTVAA
TGRLSSTEPNLQNIPVRTEAGREIRHGFVVGRAEDGTPFDCLMTADYSQIEMRIMAHLSE
DAGLIEAFNTGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLRI
SRDEAKEQMEAYFARFGGVRDYLHNVVAEARRNEYTATLFGRRRYLPDLNSDNWQRRQAA
ERMALNAPIQGTAADIIKVAMINVHKRLTAEELRSRMLLQVHDELVIEVADGERDQVETV
VREEMGNAITLSVPLEVSVGYGRSWDDAAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcgggcggcgaaggtctgtcgggggtcgccactagactcgtccgggtgagtccc
gcacagagttcgaccgccacccgcggcaagaccaaggccagcacccagccgacgttgatg
ctcctcgacgggcattccctggcctaccgggcgttcttcgcgttaccggccgagaacttc
aagaccgagaccggtcagcacaccaatgcggtgtacggcttcacctcgatgctcatcaac
ctgctgcgcgacgaggagccgacgcacatcgccgcagcgttcgacgtctcccggaagacc
ttccgctcggagatgtacccggagtacaaggcgcagcggtcgaagtcgccggacgagttc
aacgggcaggtcgacgtcaccaaggaagtcctcgatgcgctcggcatccaggtgttcgcg
atcgacggctacgaggccgacgacatcatcgccacactcgccacccaggccgaggcgcag
ggtttcaaggtcctcgtcgtcaccggtgaccgggactcgctgcagctggtcgacgattcg
gtgaccgtcctctacccgcgcaagggtgtctccgacctgacccgcttcaccccggaagag
gtcgagaagaagtacgggctgacgccatcgcagtaccccgattacgcggcgctgcgcggg
gacccgagtgacaacctcccgggtatcccgggcgtgggggagaagacggcatcgaagtgg
attcgcgaatacggttcactggcctccctcgtcgatcacgtcgatcaggtcaagggcaag
gtcggcgacgcgctgcgggccaatctcgcgtcggtacagacgaatcgtcaactcaccgaa
ctcatccgagacatgcagctgcctgccgggcccgacgatctcgcccgggtcggctgggac
cgtgaccgcatccaccagctgttcgacgatctcgagttccgggtgctgcgggatcggttg
ttctccacgctcagctcggtcgagcccgaggcggaggcaggcttcgacctcgacggttcg
gtgctggcggccggacagatcaccggttggctcgccgatcacgcacggaccgggcgcacc
gggctgaccgtgaccgcgccacacaccgtcgtcggtgccgacatcaccgggatcgcgttg
gccgccgcggacggggtgtcggcgtatgtcgacatcacccagctcgacccggccgatgag
aaggccctcggtggctggctggccgaccccgacacgcccaaggccctgcacgagaccaag
tcggcgatccacgcgctgcgctcgcgcggctggacgctgcgcggcgtcaccagcgacacc
gcgctggccgcctacctggtgcgccccggccaacgctcgttcaacctcgacgatctggcc
ttgcgctacctgcgtcgagagctgcgcgccgacgacggtgcaggcaacgatcagctctcg
ctgctcgacgaggacggtgggttggcccagcaggccgagcagcacatgctcgaggcgcgt
gcggtcgccgaactcgccgacaccctcgacaccgaactcgatcgcatcgattcgcggccc
ctgctgaccgacatggagctgccgctgctgttcgtcctgtcggatctggaggccgcaggc
atcgcggtcgacgtcgatcacttcggcaccctggaggaaggtttctccgagcgcatccgc
gccgcggcggaagcggcctacgaggtcatcggagaacagatcaatctcggttcgcccaaa
cagctgcagacggtgctgttcgacaaactcgagatgcccaagaccaagaagaccaagacc
ggctacaccaccgacgccgacgccttgcagacgttgtacgagaagaccgagcatccgttc
ctcgcacatctgctcgagcatcgcgatgccacccggctgaaggtgaccgtcgacgggttg
ctgaaatccgttgccgacgacggccggatccacacgaccttcaatcagaccgtcgcggcc
acgggacgactgtcgtcgaccgaaccgaatctgcagaacatcccggtgcgcaccgaggcc
ggccgcgagatccgtcatggcttcgtcgtcggtcgtgccgaggacgggacgccgttcgat
tgtctgatgaccgccgactacagccagatcgagatgcgcatcatggcacacctgtccgag
gacgcagggctgatcgaggcgttcaacaccggcgaggatctccacaacttcgtcgggtcc
cgcgcgttcggcgtgccgatcgacgaggtcaccaccgagatgcgccaccgcgtcaaggcc
atgtcgtacggacttgcctacgggctcagcgctttcgggctcgccgcgcagttgcggatc
agtcgcgacgaggccaaggaacagatggaggcctatttcgcccggttcggtggggtgcgc
gactacctgcacaacgtcgtcgccgaggcgcgccgaaacgagtacaccgcaacattgttc
ggccgccgacgctatctccccgatctgaacagcgacaactggcagcgccgacaggcagcc
gaacgcatggccctcaacgcgcccatccagggcaccgccgccgacatcatcaaggtcgcg
atgatcaacgtgcacaagcggctcaccgccgaggagttgcgctcgcggatgctgctgcag
gtgcacgacgaactcgtcatcgaggtcgccgacggcgagcgcgatcaggtcgagaccgtg
gtccgcgaagaaatgggcaacgccatcacgttgtcggtgccgttggaggtatcggtcggc
tacggtcgctcgtgggacgacgccgcgcactga
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