Gordonia polyisoprenivorans: GPOL_c31110
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Entry
GPOL_c31110 CDS
T01719
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase DapE
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo00300
Lysine biosynthesis
gpo01100
Metabolic pathways
gpo01120
Microbial metabolism in diverse environments
gpo01230
Biosynthesis of amino acids
Module
gpo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GPOL_c31110 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gpo01002
]
GPOL_c31110 (dapE)
Enzymes [BR:
gpo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GPOL_c31110 (dapE)
Peptidases and inhibitors [BR:
gpo01002
]
Metallo peptidases
Family M20
GPOL_c31110 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AFA74126
UniProt:
H6MWC1
LinkDB
All DBs
Position
complement(3522755..3523849)
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AA seq
364 aa
AA seq
DB search
MNALDLHGDPIDLTAALVDIHSESRDETAIADAVESALREQTTGFEIVRHGNRVLARTDR
GLDSRVILAGHLDTVPVAGNLPSRRTDDTAEGEVLHGCGTVDMKSGDAVFLHLAATLADP
RHDLTLIFYDCEEIAAEYNGLGVIERELPQWLSGDVAILGEPTAGQIEAGCQGTLRVRLT
ATGTRAHSARAWMGDNAIHKLGEVLTTLAGYSPRRVDIDGCEYREGLSAVGIGGGVAGNV
VPDAAHVDVNFRFAPDHSIESALDHVREVFAGPLASGAVTLELTDSAAGALPGLSHPAAA
ALVDAAQGRFRAKYGWTDVSRFSALGIPAVNLGPGDPSLAHRVDERVPVAQIREVTELLR
TYLS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgctctcgacctccatggcgatccgatcgacctgaccgcggcgctggtcgacatc
cacagtgaatcccgggacgaaaccgccatcgccgacgccgtcgaatccgcgctccgggag
cagaccaccggcttcgagatcgtccgtcacggcaaccgggtgctcgcgcgcaccgaccgg
gggctcgacagccgggtcatcctcgccgggcacctcgacacggtgccggtcgcgggaaat
ctgccgagccggcgcaccgacgacaccgccgagggcgaggtcctgcacgggtgcggaacc
gtggacatgaaatccggtgacgcggtgttcctgcatctcgcggcgacgctggccgatccg
cgccacgacctcacgctcatcttctacgactgcgaggagatcgccgccgagtacaacggg
ctgggggtcatcgaacgtgaactgccgcagtggctttccggcgacgtggcgatcctcggg
gaacccacggccgggcagatcgaggcaggatgccaaggcactctgcgggtacgcctgacc
gcaaccgggacgcgggcacattcggcgcgagcgtggatgggcgacaacgcgattcacaag
ctgggggaggtgctcaccaccctcgccgggtactcgccgcgccgcgtcgacatcgacgga
tgcgagtaccgcgaggggctctcggccgtcgggataggcggcggggtggccggcaacgtc
gtacccgacgccgcccacgtcgacgtcaacttccgtttcgcgcccgaccacagcatcgag
agcgcactcgaccacgttcgcgaggtgttcgccgggccgctcgcctccggtgcggtgacg
ctcgaactcactgattccgccgcaggcgcgttgcccggcctgtcgcatccggctgctgcg
gcactcgtcgacgccgcgcaggggcgattccgcgccaagtacggctggaccgacgtgtca
cgattctcggctctgggtattcccgcggtgaacctcggaccgggggacccgagcctggcc
caccgggtcgacgaacgcgtcccggtcgcccagatccgcgaggtcaccgagttgttgcgg
acctacctgagctga
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