Gordonia polyisoprenivorans: GPOL_c33060
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Entry
GPOL_c33060 CDS
T01719
Symbol
mscS
Name
(GenBank) mechanosensitive ion channel MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpo02000
]
GPOL_c33060 (mscS)
Transporters [BR:
gpo02000
]
Other transporters
Pores ion channels [TC:
1
]
GPOL_c33060 (mscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AFA74320
UniProt:
H6MY93
LinkDB
All DBs
Position
complement(3715231..3716226)
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AA seq
331 aa
AA seq
DB search
MLAATSPHHVLAATSPQNATEQLIGSIYVWLVTNGLQMVTWVLGGLIVIRLIRWSAAKYA
ARVDSSFHNSDLIVQTEDTKHRRALVDVVAWVLIVVVIAIVLIRFLVILNVPITGLTGPG
AVIGAALGFGAQRVVQDILAGFFVVAEKQYGYGDVVSLMVTGGQNADGTVEDVTLRVTKL
RTSEGEVITVPNGQIIKATNLSKDWARAVVDVPVPAKADIGLVNETLDRVGREFYATARW
HDLLLDTPSSLGVTDLELDAITVRIVARTLPGKQFEVSRALRVSIVRALAAEGITVAAGH
DAQSGAAPPATLADTVSAPGTDGRTDRDGGA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgctggcggcgacgagtccgcatcacgtccttgctgcgaccagtccgcagaacgcgacc
gagcagctcatcgggtccatctacgtctggctggtcaccaacgggctgcagatggtcacg
tgggtcctcggcggactcatcgtcatccgtctcatccgatggtcggcggcaaagtacgcc
gcgcgcgtcgacagcagcttccacaacagcgacctgatcgtccagaccgaggacaccaaa
catcgtcgggccctggtcgacgtggtcgcgtgggtgctgatcgtcgtggtcatagcgatt
gtgctgatccgcttcctggtgatcctcaacgtgcccatcaccggcctgaccggcccgggt
gcggtgatcggtgcagccctcggcttcggtgcgcagcgcgtggtgcaggacatcctggcc
gggttcttcgtggtcgccgagaagcaatacggatacggcgacgtggtgagtctgatggtc
accggcggccagaacgccgacggcaccgtcgaggacgtcaccctgcgcgtgaccaaactg
cgcaccagcgagggcgaggtcatcaccgtgcccaacggccagatcatcaaggccaccaac
ctgtccaaggactgggcgcgggcggtggtggacgtcccggtgccggccaaggccgacatc
ggactcgtcaacgaaaccctcgaccgggtgggccgcgagttctacgcgaccgcgcgttgg
cacgacctgctcctcgacacaccgtcgtcactcggggtcaccgacctcgaactggacgcg
atcaccgtccgcatcgtcgcgcggacgctgcccggcaaacagttcgaggtgagccgggcg
ctgcgcgtgtcgatcgtgcgcgctctcgccgccgagggcatcaccgtcgccgccgggcac
gacgcccagtccggtgccgccccgccggcgacactcgccgacaccgtgagcgcacccggc
accgacggccgtaccgaccgggacgggggagcctga
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