KEGG   Gordonia polyisoprenivorans: GPOL_c36790
Entry
GPOL_c36790       CDS       T01719                                 
Symbol
xth3
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GPOL_c36790 (xth3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpo03400]
    GPOL_c36790 (xth3)
Enzymes [BR:gpo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     GPOL_c36790 (xth3)
DNA repair and recombination proteins [BR:gpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GPOL_c36790 (xth3)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AFA74691
UniProt: H6N2R4
LinkDB
Position
complement(4189319..4190224)
AA seq 301 aa
MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDDVFDTVLGPEFTDRGYEFAHV
GQGQWNGVAILSRVGLSEVRRGFDGAPGYPDPESTPEARAVSAICGGVRVYSLYVPNGRE
PDSDHYRYKLAWLDRLREVVAPEAATTMLCGDINIAPADADVFDPKAYEGHTHVTEPERA
ALAGLEDLGLTDVVRTRWPSERVFSYWDYRAGMFHKDLGMRIDLILAGADTAPRVAAAWV
DRAARKGSKPSDHAPVIVDLDDAPDGDIGPMVPPPSNPARRGSSKVSLPQAKDVGPGRAS
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcgtgtggcgacctggaacgtgaactcggtgaaacagcggatccctcggctgctgccc
tggctggacgagcggcgccccgatgtggtgtgcctgcaggagaccaaactctccgacgac
gtcttcgacaccgtcctcgggcccgaattcaccgaccgcggttacgagttcgcccacgtc
gggcaggggcagtggaacggtgtcgcgatcctgtcccgggtcggtctgtccgaggtacgc
cgcggattcgacggtgcgccaggctatcccgaccccgagtcgacgcccgaggcgcgcgcg
gtgtcggcgatctgcgggggagtgcgcgtgtactccctgtatgtacccaacggtcgcgag
cccgactccgatcactaccgctacaagctcgcgtggctcgaccggctccgggaagtggtc
gcgcccgaggccgccacgacgatgctgtgcggcgacatcaacatcgcgcccgccgacgcc
gatgtgttcgaccccaaggcctatgagggccacacccacgtcaccgaacccgagcgcgcg
gcgctcgcaggtctggaggatctcggcctgaccgacgtggtgcgcacccggtggccgtcc
gaacgcgtcttcagttattgggactaccgtgccggaatgttccacaaggatctcggcatg
cggatcgacctgatcctcgccggcgccgacaccgcaccccgggtggccgcggcgtgggtg
gaccgcgccgcgcgcaaggggtccaagccgagcgatcacgcaccggtcatcgtcgacctc
gacgacgcccccgacggcgacatcggaccgatggttccgccgccgtccaatccggcgcgc
cgcggatcgtcgaaggtgtcgttgccgcaggccaaggacgtcggcccgggccgggcctcc
tcgtga

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