Gordonia polyisoprenivorans: GPOL_c47350
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Entry
GPOL_c47350 CDS
T01719
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo00470
D-Amino acid metabolism
gpo00550
Peptidoglycan biosynthesis
gpo01100
Metabolic pathways
gpo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GPOL_c47350 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GPOL_c47350 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GPOL_c47350 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpo01011
]
GPOL_c47350 (ddl)
Enzymes [BR:
gpo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GPOL_c47350 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gpo01011
]
Precursor biosynthesis
Amino acid ligase
GPOL_c47350 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFA75734
UniProt:
H6N077
LinkDB
All DBs
Position
5351354..5352430
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AA seq
358 aa
AA seq
DB search
MASPLLRLIVLYGGVSAEHDVSRVTAAHVIAAADPAKYEVRPIGIAKDGTWVRNDKVIAA
LAEGTELPGELEIAGTAVEPLAELRRQSDDAIGVVLPLLHGPHGEDGTIQGMLELFGLPY
VGAGVLSSAVCMDKAMAKVVAAQAGIPQCRWLEFRDGVDDPRTIAFRAIEEMGLPLFVKP
ANMGSSVGITKAHDAAELDAAINLALRYDDVVVIEEMVDGREVEVAVLGNALPETSVPGE
IMPGSEFYDYEDKYITGAAKLVIPAPLSAQAAADVRELAAKVFTAMRCAGMARVDFFYEE
FGRGWLLNEVNTIPGFTPGSMYPKLWDATGLPYPDLIDRLVTLALESHRRRTGFSTEH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcccctgctgcgtctgatcgtgctctacggcggtgtgtccgccgagcatgac
gtttcccgggtcaccgcggcgcacgtgatcgccgccgccgaccccgccaagtacgaggtg
aggccgatcggcatcgccaaggacggcacctgggtgcgcaacgacaaggtgatcgccgcg
ctcgccgagggcaccgagctgcccggtgaactcgagatcgccggtacggccgtcgaacca
ctcgccgagttgcgccgacagtccgacgacgccatcggtgtggtgttgccgctgctgcac
ggaccgcacggtgaggacggcacgatccagggcatgttggagctgttcgggctgccctat
gtcggcgccggggtgctcagttccgcggtgtgcatggacaaggcgatggccaaggtggtt
gccgcgcaggccgggatcccgcagtgccggtggctggagttccgcgatggcgtcgacgat
ccgcgcaccatcgccttccgggctatcgaagagatggggcttccgctgttcgtcaagccc
gcgaacatgggctcgtcggtggggatcaccaaggcccacgatgccgccgaactcgacgcc
gcgatcaatctcgcgctgcgctacgacgacgtcgtcgtcatcgaggaaatggtcgacggc
cgtgaggtcgaggtggccgtgctcggcaatgcgctgccggagacgtcggtgcccggggag
atcatgccgggcagcgaattctacgactacgaggacaaatacatcaccggtgccgcgaag
ctggtgatcccggcaccgctgtcggcgcaggccgccgccgacgtccgcgagctcgcggcg
aaggtgttcacggcgatgcgttgcgcgggcatggcacgcgtggacttcttctacgaggag
ttcggtcggggctggctcctcaacgaggtcaacacgattcccggtttcaccccgggctcg
atgtatccgaagctctgggatgccaccggactgccctaccccgacctcatcgaccgcctg
gtcacgctcgcgctcgaatcgcatcgccgtcgtaccgggttctccaccgaacactga
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