Glutamicibacter protophormiae: JQN66_06500
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Entry
JQN66_06500 CDS
T07442
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gpr
Glutamicibacter protophormiae
Pathway
gpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQN66_06500 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpr03021
]
JQN66_06500 (rho)
03019 Messenger RNA biogenesis [BR:
gpr03019
]
JQN66_06500 (rho)
Transcription machinery [BR:
gpr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JQN66_06500 (rho)
Messenger RNA biogenesis [BR:
gpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JQN66_06500 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QRQ79855
LinkDB
All DBs
Position
1374734..1377193
Genome browser
AA seq
819 aa
AA seq
DB search
MTETTSLNEGVDTKTSENKSSGLASLKMTQLQQLASQLGITGGSRMRKADLVAAISSHQR
GGSIAAKDAEAAKAAEPKNDAAQAPAAKEAPAKAARTRRAPKAAAEAPQAAEAPAQEAAP
AAEAAEPKAEKPARTRRTSRRVTDSGKIGAKDEAAKADTAEAPAQAEAAVEAPAEDAAQA
SAKERAPRQRRNTRAAKAEQGSEAPAQDAEAAAGEAKAASAEADAAESADAEKSGDQREE
RRERGNRRERGNRRERNNDRGDRAESSEQDSAEQSEDRRERNNDRNERNANRRERNNDRN
ERGNDRGDRGNDRAESSEQDSAEQSEDRRERNNDRNERNANRRERNNDRNERGNDRGDRG
NDRAESSEQDSAEQSEDRRERNNDRNERNANRRERNNDRNERGNRRDRNDRNDRNQDRND
RNNRNRRGRREDDEPQLSEDDVLLPIAGILDVLENYAFVRTAGYLPGPNDVYVTLGQVKK
YNLRKGDAIVGAIRAPRDGETPNPRQKFNALVQLTSVNGKMPEDNRERVEFNKLVPLYPT
ERLRLETDPKLVGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQSIANAITTNNPEVHLM
MVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVEMGMDVVVLLD
SMTRLGRAYNLAAPASGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGS
KMDEVIFEEFKGTGNMELRLSRQLAEKRIFPAVDVNASSTRREEQLMSAEEVRIMWRLRR
MLSGIDPQQALEVLTGKIRDTQSNAEFLMLVNKTTPDKH
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccacgagcctgaatgaaggcgtggacaccaagacttccgagaacaagagc
tcgggcctggcctctttgaagatgacccagctgcagcaactggcttcgcagctcggcatc
accggcggatctcgcatgcgcaaggccgacctggttgccgccatcagctcccaccagcgc
ggcggctcgatcgccgcgaaggacgctgaagcagccaaggccgcggagccgaagaacgat
gctgcccaggcgcctgccgccaaggaagcgccagccaaggcagcacgcacccgtcgtgca
ccgaaggccgccgccgaggcgccgcaggcagccgaggccccagcccaggaggccgcaccg
gccgccgaagccgcagagccaaaggccgagaagcctgcccgcacccgccgtacctcgcgc
cgcgtgaccgattcgggcaagatcggcgccaaggacgaggcagccaaggcagacaccgcc
gaggcgccggcccaggccgaagccgcggtggaagcaccggccgaggatgccgcccaggca
tcggccaaggagcgcgcgccacgccagcgccgcaacacccgcgccgccaaggccgagcag
ggcagcgaagcaccggcgcaggacgccgaagctgccgcaggcgaggcgaaggccgcttcg
gccgaggccgacgccgccgagtccgccgacgcggagaagtccggcgatcagcgcgaagag
cgccgtgagcgcggcaaccgccgtgaacgcggcaaccgccgcgagcgcaacaacgaccgc
ggcgaccgcgccgagtcctccgagcaggattcggccgagcagtccgaggatcgccgcgag
cgcaacaacgaccgcaacgagcgcaacgccaaccgtcgcgagcgcaacaacgaccgcaac
gagcgcggcaacgaccgcggcgaccgcggcaacgaccgcgccgagtcctccgagcaggat
tcggccgagcagtccgaggatcgccgcgagcgcaacaacgaccgcaacgagcgcaacgcc
aaccgtcgcgagcgcaacaacgaccgcaacgagcgcggcaacgaccgcggcgaccgcggc
aacgaccgcgccgagtcctccgagcaggattcggccgagcagtccgaggatcgccgcgag
cgcaacaacgaccgcaacgagcgcaacgccaaccgtcgcgagcgcaacaacgaccgcaac
gagcgcggcaaccgccgtgatcgcaacgatcgcaacgaccgcaaccaggaccgcaacgac
cggaacaaccgcaaccgccgcggccgccgcgaggacgacgagccgcagctgagcgaggac
gacgtcctgctgccgatcgccggcatcctggacgtgctggagaactacgcgttcgtccgc
accgccggctacctgcccggcccgaacgacgtctacgtcaccctgggccaggtcaagaag
tacaacctgcgcaagggcgacgccatcgtcggcgccatccgcgcaccgcgcgacggcgag
accccgaacccgcgccagaagttcaacgccctggtgcagctgacttccgtgaacggcaag
atgccggaggacaaccgcgagcgagttgaattcaacaagctggtgccgctgtacccgacc
gagcgcctgcgcctggagaccgacccgaagctggtcggcccgcgtgtcatcgacctggtc
gccccgatcggcaagggccagcgcggcctgatcgtctcgcctccgaaggccggcaagacg
ctgatcctgcagtccatcgcgaacgccatcaccaccaacaaccccgaggtgcacctgatg
atggtgctggtggacgagcgtcccgaagaagtcaccgacatgcagcgcaccgtcaagggc
gaggtcatcgcctcgaccttcgaccgcccggccgacgaccacaccaccgtggccgagctg
gccatcgagcgcgccaagcgcctggtggagatgggcatggacgtcgtggtgctgctggac
tcgatgacccgcctgggccgcgcctacaacctggccgccccggcctcgggccgcatcctg
tccggcggcgtggactccgccgcgctgtacccgccaaagcgcttcttcggcgccgcccgc
aacatcgagaacggcggctcgctgaccatcctggccaccgcgctggtggagaccgggtcc
aagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatggagctgcgcctg
agccgccagctcgccgagaagcgcatcttcccggcggtcgacgtcaacgcgtcctcgacc
cgtcgcgaagagcagctgatgagcgccgaagaggtgcgcatcatgtggcgtctgcgccgc
atgctttcgggcatcgacccgcagcaggcgctggaggtgctcaccggcaagatccgcgac
acccagtccaacgcggagttcctgatgctggtgaacaagaccacaccggacaagcactag
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