Glutamicibacter protophormiae: JQN66_10435
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Entry
JQN66_10435 CDS
T07442
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gpr
Glutamicibacter protophormiae
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpr03016
]
JQN66_10435
Enzymes [BR:
gpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JQN66_10435
Transfer RNA biogenesis [BR:
gpr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JQN66_10435
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QRQ77361
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All DBs
Position
2231452..2232699
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AA seq
415 aa
AA seq
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MSNSQPTAPLPASDESQPPAPPLIPLTAPRDGVPEVINTPPALRRAVRALREGTGDLAVD
TERASGFRYGQRAFLVQIRREGAGTWLIDPETLDNLAPLVEFANELPWILHAATQDLPCL
NELGMAPTSLFDTELAGRLAGFPRVSLGTMVAELLGLQLAKEHSAVDWSTRPLPESWLTY
AALDVEVLEELRQEITGVLEEQGKLEFARQEFDFELIPPQPTEVAEPWRKLSGIHKIKSK
RNLAVARELWLSRESLAKSRDVAPGRLLPDRAIMAAIEHRANSVPALLQIPGFHGRSVKR
DAPRWLDAVQRGRSTRDLPELRTDKAGLPNPRAWTEKNPKAADRLASAKLVMTEVSEAWD
IPAENLLTPKYLRELCWTPPAVISEGSVDESLGAMGARPWQRELLADKLAAALKA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcccagccgaccgcaccattacccgcttccgacgaatcgcagccccctgcg
ccgccgctgatcccgctcaccgcgccgcgcgacggcgtccccgaggtcatcaataccccg
cccgcgctgcgccgggcagtgcgcgccctgcgcgagggcaccggggacctggcggtggac
accgaacgcgccagcggcttccgctacggccagcgcgcgttcctggtgcagatccgccgc
gagggcgccggcacctggctgatcgacccggaaaccctggacaacctggcgccgctggtg
gaattcgccaacgagctgccctggatcctgcacgccgccacccaggacctgccctgcctg
aacgagctgggcatggcgccaacctcgctgttcgacaccgaactggccggccggctggcc
ggcttcccgcgcgtttcgctgggcaccatggtcgccgagctgctgggcctgcagctggcc
aaggagcactcggccgtggactggtccacccgcccgctgcccgagtcctggctgacctac
gcggcgctggacgtcgaggtgctcgaagaactgcgccaggagatcaccggggtgctcgag
gagcagggcaagctggagttcgcgcgccaggagttcgacttcgagctgatcccgccgcag
cccaccgaggtggccgaaccgtggcgcaagctctcgggcatccacaagatcaagagcaag
cggaacctggccgtggcccgcgagctgtggctctcgcgcgaatcgctggccaagagccgc
gacgtcgccccgggcagactgctgcccgaccgggccatcatggccgcgatcgaacaccgc
gccaactcggtgccggcgctgctgcagatccccggtttccacgggcgcagcgtcaagcgc
gacgccccgcgctggctggatgcggtgcagcgcgggcgcagcacccgcgacctgcccgag
ctgcgcacggacaaggcagggctgcccaacccgcgcgcctggaccgagaaaaatccgaag
gcggccgaccggctcgccagcgccaagctggtgatgaccgaggtcagcgaggcatgggac
atccccgccgagaacctgctgacccccaagtacctgcgcgagctgtgctggactcccccg
gcggtcatttccgagggatcggtcgacgaatccctgggcgccatgggcgcccgcccgtgg
cagcgcgagctgctggccgacaagctggccgccgcactgaaggcctag
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