Glutamicibacter protophormiae: JQN66_10780
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Entry
JQN66_10780 CDS
T07442
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gpr
Glutamicibacter protophormiae
Pathway
gpr03030
DNA replication
gpr03430
Mismatch repair
gpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JQN66_10780 (dnaE)
03430 Mismatch repair
JQN66_10780 (dnaE)
03440 Homologous recombination
JQN66_10780 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpr03032
]
JQN66_10780 (dnaE)
03400 DNA repair and recombination proteins [BR:
gpr03400
]
JQN66_10780 (dnaE)
Enzymes [BR:
gpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JQN66_10780 (dnaE)
DNA replication proteins [BR:
gpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JQN66_10780 (dnaE)
DNA repair and recombination proteins [BR:
gpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JQN66_10780 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QRQ77426
LinkDB
All DBs
Position
complement(2313654..2317217)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSATRDGFVHLHTHTEYSMLDGAARLGELFAEANRQGMEAMAITDHGYLFGAFDFWRQAT
GAGIKPIIGVEAYVTPGTHRTDKTRVKWRTEERQKGDDVSGGGLYNHMTLLSYNNTGMDN
LFKGSSRASLDSVFGKYPRWDRELLSDHHEGLIATTGCPSGEVQTKLRLGQYDAAKAAAA
EFQDLFGKGNYFCEIMDHGLEIERRITKDLLRLAKELAIPLVATNDLHYTHESDAKAHEA
LLAINSGSTLDEPTYDQGGSRFAFSGTGYYLKSAREMRELFKEFPEACDNTLEIADRVDL
TFDTNANYMPKFPCPPGEDETSWLIKEVDKGLHYRYPNGIPEASRKQADFELDVIIKMGF
PGYFLVVADFINWSKDHGIRVGPGRGSGAGSMVAYAMRITDLDPLVHGLIFERFLNPERV
SMPDFDVDFDDRRRSEVIKYVTEKYGDERVSMIVTYGSIKTKQALKDSSRVLGYPFSMGE
SLTKALPPAVMAKDIPLNDIENPDSKRYSEAGDFRNLVANDPEAKRVFETAKGLEGLKRQ
WGVHAAGVIMSSDPIIDVVPIMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISD
ALANVKANKGVDLDLETLPLDDASTYQLLARGDTLGVFQLDGGPMRSLLKMMRPDNFEDI
SAVLALYRPGPMGANSHTNYALRKNKLQEETPIHPTLEEPLREILGGTFGLIVYQEQVMS
IAQKLAGFSLGQADILRRAMGKKKKSELDKQFAGFSKGMTDNGFTMEAVQALWDILLPFS
DYAFNKAHSAAYGVVSYWTAYLKEHYTAEYMAALLTSVGDDKDKLALYLNECRHLGITVL
PPDVNESALTFTPVGKDIRFGMGAIRNVGSNVVDGMVQARKEKGAYTDFSDFLNKVPAVV
CNKRTIESLIKAGAFDSMGHPRRALVAIHEEAVDSVIQLKRNEAANQFDLFSALDPSEAS
DAMTVAVPDLPDWDKKEKLAYERDMLGLYVSDHPLQGLGSALEQYADMSVTHVLSDDGPQ
DGHIISIAGMISGLQRRIAKKSGNPYARCEVEDLSGSMEVMFFGQAYQPIAEVLADDLIV
VIKGRVQRRDDGSITLNAQEMMIPELSEDANGGPVVIGIPTHKATESLVQKLGDVLRTHS
GNTEVRVKLTGSRGTSLMRLGMNFRVNPNPALFGDLKVLLGPNCLDV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgacacgtgacggattcgtccatcttcatacacacaccgaatactccatgctg
gacggggcggccagactaggcgaactcttcgccgaggccaaccgccagggcatggaggcc
atggccatcaccgaccatggctacctcttcggagccttcgacttttggcgccaggctacc
ggtgcaggcatcaagccgatcatcggcgtggaagcctatgtcacccccggcacccaccgc
accgacaagacgcgtgtcaagtggcgtaccgaggagcgccagaaaggcgacgacgtttcg
ggcggcggcctctacaaccacatgaccttgctgtcatacaacaacacgggcatggacaac
ctcttcaagggctcctcgcgcgcctcgctggactccgtcttcggcaagtacccgcgctgg
gaccgcgagctgctcagcgaccaccacgagggcctgatcgccaccaccggctgcccctcg
ggcgaggtgcagaccaagctccgtctgggccagtacgacgccgccaaggccgcggccgcc
gaattccaggacctgttcggcaagggcaactacttctgcgagatcatggaccacggtctg
gagatcgaacgccgcatcaccaaggacctgctgcgcctggccaaggaactggccattccc
ctggtcgccaccaacgacctgcactacacccacgagtccgacgcgaaggcccacgaagcg
ctgctggccatcaactccggttccacgctggatgagccgacctatgaccagggcggcagc
cgcttcgctttcagcggcaccggctactacctgaagagcgcgcgcgaaatgcgcgagctg
ttcaaggaattcccggaggcgtgcgacaacacgctggaaatcgcggaccgcgtggatctg
accttcgacaccaacgccaactacatgccgaagttcccctgcccgcccggcgaggacgag
accagctggctgatcaaggaagtcgacaagggcctgcactaccgctaccccaacgggatc
cctgaggcttcgcgcaagcaggcggattttgaactcgacgtcatcatcaagatgggcttc
cccggctacttcctggtcgtggcggacttcatcaactggtccaaggaccacggcatccgc
gtcggcccgggacgcggttccggtgcaggctccatggtcgcctacgccatgcgcatcacc
gacctcgacccactggtccatggcctgatcttcgagcgcttcctgaacccggaacgcgtt
tccatgcccgacttcgacgtcgacttcgatgatcgccgccgctcggaagtcatcaaatac
gtgaccgagaagtacggcgatgaacgcgtatccatgatcgtgacctacgggtccatcaag
accaagcaggcgctgaaggactcctcgcgcgtgctgggctaccccttctccatgggcgag
tccctcaccaaggcgctgccgcctgcggtgatggccaaggacatcccgctcaacgacatc
gagaacccggactccaagcgctactcagaggccggggacttccgcaacctcgtggccaac
gaccccgaagccaaacgagtcttcgaaaccgccaagggcctggaaggcctgaagcgccag
tggggtgtgcacgccgccggcgtgatcatgagctcggatccgatcatcgatgttgtcccg
atcatgcggcgcatccaggacggccaggtcatcacgcagttcgactacccgacctgtgaa
ggcctggggctgatcaagatggacttcctcggcctgcgaaacctcaccatcatctccgac
gcgctggcgaacgtgaaggccaacaagggggtggacctcgacctggagaccctgcccctg
gacgatgcgtccacctaccagctgctggcccgcggcgacaccctgggagtgttccagctc
gatggcggtccgatgcgctcgctgctgaagatgatgcgcccggacaacttcgaagacatt
tccgcggtgctcgcgctgtaccgcccgggccccatgggcgccaactcgcacaccaactac
gcgctgcgcaaaaacaagctgcaggaagaaactcccatccacccgacgcttgaagaaccg
ctgcgggaaatcctgggcggcaccttcggcttgatcgtgtaccaagagcaggtcatgtcc
atcgcgcagaagctggccggcttctcgctggggcaggcagacatcctgcgccgtgccatg
ggcaagaaaaagaagtcggaactggacaagcagttcgccggcttctcgaagggcatgacc
gacaacggcttcacaatggaggccgtgcaggccctgtgggacatcctgctgcccttctcc
gactatgcgttcaacaaggcccactctgcggcctacggcgtggtgtcctactggaccgcg
tacctcaaggagcactacacggccgaatacatggccgcgctgctgacctcggtgggcgat
gacaaggacaagctggcgctgtacctgaacgagtgccgccacctgggcatcaccgtgctg
ccgccggacgtcaacgaatcggccttgaccttcaccccagtgggcaaggacatccgcttc
ggcatgggcgcgatccgcaacgtcggctccaacgtcgtggacggcatggtgcaggcacgc
aaggaaaagggcgcctacaccgacttcagcgacttcttgaacaaggtcccggcggtggtc
tgcaacaagcgcaccatcgaatccctgatcaaggccggcgccttcgactccatgggccac
ccgcgccgtgcgctcgttgccatccacgaagaagccgtggactcggtcatccagctcaag
cgcaacgaggcggccaaccagttcgacctgttcagcgcgctggatccctccgaagcgtcg
gacgccatgaccgtcgcggtcccggacctgccggactgggacaagaaggaaaaactggcc
tacgagcgcgacatgctcggactctacgtctccgatcacccgctccagggcctgggctca
gcgctggaacagtacgcggacatgtccgtgacccacgtactctccgacgacgggccgcag
gacggccacatcatctccatagcgggcatgatctccggcctgcagcggcgcatcgccaag
aagagcggcaacccgtatgcgcgctgcgaggtggaggacctttcgggctccatggaagtc
atgttcttcgggcaggcctaccagccgatcgccgaggtgctggccgatgacctgatcgtg
gtcatcaaggggcgcgtgcagcgccgcgacgacggatccatcaccctgaacgcccaggag
atgatgatccccgagctgtccgaggacgccaacggcggcccggtggtcatcggcattccg
acccacaaggccaccgaatccctggtgcagaagctcggcgacgtgctgcgcacccacagc
ggcaataccgaggtccgggtgaagctcaccggcagccgcggcacctcgctgatgcgcctg
ggcatgaacttccgggtgaacccgaaccccgcgctgttcggcgacctgaaggttctgctc
ggccccaactgcctggacgtgtag
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