Glutamicibacter protophormiae: JQN66_11905
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Entry
JQN66_11905 CDS
T07442
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gpr
Glutamicibacter protophormiae
Pathway
gpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JQN66_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpr03021
]
JQN66_11905
03400 DNA repair and recombination proteins [BR:
gpr03400
]
JQN66_11905
Enzymes [BR:
gpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JQN66_11905
Transcription machinery [BR:
gpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JQN66_11905
DNA repair and recombination proteins [BR:
gpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JQN66_11905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QRQ77633
LinkDB
All DBs
Position
complement(2559274..2560275)
Genome browser
AA seq
333 aa
AA seq
DB search
MLITQRPTLTEEVVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFTTVAGVKEDVTELVLNIKNLSVSSEHDEPVVAYLRKQGPGVVTAADITPPAGVEFHN
PDLHIATLNANGKFDMELTIERGRGYVSAAQNKSADGEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDRLIVDVETKESITPRDAVASAGTTLVELFGLFRELNTAAEGIEIGPSPTD
AALAADMALPIEDLELTVRSYNCLKREGIHSVGELVTRSEADLMDIRNFGAKSIDEVKAK
LVELGLALKDSPPGFDLAARSAIDDGDDYDEGL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattacgcagcgcccaaccctgaccgaagaagtagttgccgaaaaccgctcccgt
ttcgttatcgaaccgttggagccaggctttggttacacccttggtaactcgctccgccgc
accctgctgtcctcgattcctggtgcatccgtcaccagcattcgtatcgacggcgtgctg
cacgagttcaccaccgtagccggtgtcaaggaagacgtcaccgaactggttctgaacatc
aagaacctgtccgtgtcttccgagcacgacgagccagtcgtcgcctacctgcgcaagcag
ggcccaggcgtcgtcaccgcagcggacatcaccccgccagccggtgtggagttccacaac
cctgatctgcacatcgcgaccctgaacgccaatggcaagttcgatatggaactgaccatt
gagcgcggccgcggttatgtgtctgccgctcagaacaagagcgctgatggcgagatcggt
cgcatccctgtggattcgatctactccccagtgctgaaggtgaccttccgcgtggaggcc
acccgtgttgagcagcgcaccgacttcgatcgtttgatcgttgacgtggagaccaaggaa
tcgatcaccccgcgcgatgcagttgcatccgcaggtaccaccctggttgaactgttcggt
ttgttccgcgaactgaacactgcagcagagggtatcgaaatcggcccatcgccaaccgac
gcagctctggctgccgacatggcgttgccgattgaggatctggaactcaccgttcgttcg
tacaactgcttgaagcgtgagggcatccactctgtgggtgaacttgtcactcgctccgag
gccgacctcatggacatccgcaacttcggcgcgaagtccattgacgaagtcaaggccaag
cttgttgaactgggtctggccctgaaggattcccctccaggcttcgatctggccgctcgt
agcgccatcgacgatggcgacgactacgacgagggtctgtaa
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