Glutamicibacter protophormiae: JQN66_12095
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Entry
JQN66_12095 CDS
T07442
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gpr
Glutamicibacter protophormiae
Pathway
gpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JQN66_12095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpr03021
]
JQN66_12095
03400 DNA repair and recombination proteins [BR:
gpr03400
]
JQN66_12095
Enzymes [BR:
gpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JQN66_12095
Transcription machinery [BR:
gpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JQN66_12095
DNA repair and recombination proteins [BR:
gpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JQN66_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QRQ77670
LinkDB
All DBs
Position
complement(2588515..2592405)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSNDSSFGLMRINLATADEIRAWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRANVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVNEDRRHAEMPNLQAQHDLELRQLANNAEADKKAVAADLEAE
LERLEADGAKNAELNKARTLAEKTVLQIDKRAKAESERLRAVWERFKGLKVADLEGDEGL
YRTMREKYGLFFEGSMGAEAIQKRLENFDLEGEAEELKGIIENGKGQKKARALKRLKVVN
AFLANGNSPKGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSHNILKPSDGRPVALPSQDMIIGLHHLTTKREDETGAGR
VFSSVSEAIMAKDRGELHLNAPIKVRVDNFVPSDEQPAPEGWEPGTPALLETSLGQVLFN
DTLPADYPWVSRVAGKDALSDIVNDLAERYPKIVAAATLDNLKDAGFHWATRSGITVAIS
DITSNMNKAEILEPYEERARKVQGSYDKGLISDIERRQDLIDIWTKATDEVAEAMKNGME
ELNTINRMVTSKARGNWLQLRQIAGIRGLVSNPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREEDCGTKRGLTVAIADSSSGIRIKHET
VENSAYTRTLAADVKDAEGNVLAAAGSDAGDVLIDELYAAGVDEIRVRSVLTCDSAVGTC
ALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQE
LFEARTPKGVAPMSEVSGRVSIEDDEKQLRVVVTPDNGDEKQAYPVLRRARLLVEDGQSI
IAGTQLTSGTLDPKQVLRVLGPREAQKFLVREVQDVYQSQGVGIHDKHVEVIVRQMLRRV
TVIESGETELLPGELADRSRFTAANRKAVAEGKRPAAGRDEMMGITKASLATDSWLSAAS
FQETTRVLTQAAMEGKEDPLRGLKENVIIGKLIPAGTGLDRYTQVDVEPTDEAKATLFTG
TSAFSSGLYDDALEGGLSPEFRAISMDDYDHGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgattcctcattcggcctcatgcgcatcaacctcgccaccgcggacgaaatc
cgcgcttggagctacggcgaggtcaagaagcctgaaaccatcaactaccgcaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggtccttcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccgtgccaacgtgcgccgcgagcgcatgggacacatcgagcttgccgctccg
gtgacccacatctggtacttcaagggcgttccatcgcgcttgggctacctgctcgacctg
gctccgaaggacctggaaaaggtcatctacttcgccgcctacatgatcacttcggtgaac
gaggatcgccgccacgcggagatgccgaacctgcaggcacagcacgaccttgagctgcgc
cagctggccaacaacgccgaggccgacaagaaggctgttgcagccgacctggaagccgag
ctggagcgtctggaagcagacggcgccaagaacgccgagctgaacaaggcccgcaccctg
gccgagaagaccgtgctgcagatcgacaagcgcgccaaggccgagtccgagcgcctgcgt
gcggtctgggagcgcttcaagggcctgaaggtcgccgacctcgaaggcgacgaaggcctg
taccgcaccatgcgcgagaagtacggactgttcttcgaaggctccatgggcgccgaggcg
atccagaagcgtctggagaacttcgaccttgaaggcgaagccgaagagctcaagggcatc
atcgagaacggcaagggccagaagaaggcccgcgccctcaagcgcctgaaggtcgtcaac
gcattcctggccaatggcaactcgccaaagggcatggtgctcgacgccgttccagtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgtttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgactcaagcgcctgcttgacctc
ggtgcgccggagatcatcgtgaacaacgaaaagcgcatgctgcaggaagctgtggactcg
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgtcctctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaaccttctgggtaag
cgtgttgactactcgggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggtctgccaaagcagatggctctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcgcagaacatcaagagcgccaagcgcatggttgagcgctaccgt
ccgcaggtgtgggatgtcctcgaagagatcatcaccgagcacccggtactgctgaaccgt
gcacctaccctgcaccgcctgggcatccaggccttcgagccacagctggtcgaaggcaag
gccctgcagctgcacccgctggtttgcggcgcgttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgagccccgaagcccaggctgaagcacgcatcctgatgctg
tcctcgcacaacatcctgaagccttcggacggccgtccggtggctctgccttcgcaggat
atgatcatcggcctgcaccacctcaccaccaagcgtgaggacgagacgggcgccggtcgc
gtgttctcctcggtttccgaggccatcatggccaaggaccgcggcgagctgcacctgaac
gccccgatcaaggtgcgtgtcgacaacttcgttccttcggacgagcagccggcccccgag
ggctgggagccgggcaccccggcactgctggagacctcgctgggacaggtgctgttcaac
gacaccctgcctgcggactacccgtgggtttcccgcgtggccggcaaggatgcgctctcg
gacatcgtcaacgacctggccgagcgctacccgaagattgtcgcagcggcaacgctggac
aacctgaaggatgccggtttccactgggctacccgctcgggcatcaccgtggcgatctcg
gacatcacctcgaacatgaacaaggccgaaatccttgagccgtacgaggaacgcgcccgc
aaggtgcagggttcgtacgacaagggcctgatctccgacatcgaacgccgccaggacctg
atcgacatctggaccaaggccaccgacgaggttgccgaggccatgaagaacggcatggaa
gagctgaacaccattaaccgcatggtgacctccaaggctcgtggtaactggctgcaactg
cgccagatcgccggtatccgtggcctggtgtccaaccctaagggcgagatcatcccgcgt
ccgatcaagtcctcctaccgtgagggcctgtcggtgctggagtacttcatcgcaacccac
ggcgcccgcaagggcctggcggataccgcgctgaagaccgccaactcgggttacctgacc
cgtcgtctggtggacgtctcgcaggacgtcatcgttcgcgaagaggactgcggcaccaag
cgcggcctgaccgtcgcgatcgcggactcctcctcgggcatccgcatcaagcacgagacc
gtggagaactcggcctacacccgtacgctggccgccgacgtcaaggacgccgaaggcaac
gtactggccgccgccggttcggatgcgggcgatgtgctgatcgacgagctgtacgctgca
ggcgtggatgaaatccgcgtccgctccgtgctgacctgcgactcggctgttggaacctgt
gccctgtgctacggccgttcgctggccaccggcaagaccgtggacatcggcgaggccgtg
ggcatcatcgccgcgcagtccatcggcgagcccggtacccagctgaccatgcgtaccttc
cacaccggtggtgtggcatcggccgacgatatcacccagggtctgccccgtatccaggag
ctcttcgaagcccgtaccccgaagggtgtggctccgatgtcggaggtctccggtcgcgtg
tcgatcgaggacgacgagaagcagctgcgtgttgtggtgaccccggacaacggcgacgag
aagcaggcctacccggtgctgcgtcgtgcccgtctgctggtggaagatggccagtccatc
atcgccggtacccagctgaccagcggtaccctggacccgaagcaggtgctgcgagttctg
ggcccacgcgaggcgcagaagttcctggtccgcgaggtccaggacgtgtaccagtcccag
ggtgtgggcatccacgataagcacgtggaagtcatcgtccgacagatgctgcgtcgcgtc
accgtcatcgagtccggcgagaccgagctgctcccgggcgagctggccgaccgttcgcgc
ttcaccgctgcgaaccgcaaggccgtcgccgagggcaagcgtccggccgcaggccgcgac
gagatgatgggtatcactaaggcatcgctggccaccgactcgtggctgtcggctgcttcc
ttccaggaaaccacccgcgtgctgacccaggccgcgatggagggcaaggaagatccgctg
cgcggtctgaaggagaacgtgatcatcggtaagctgatcccggccggtaccggtctggat
cgctacacccaggtcgacgtcgagccaaccgacgaggcaaaggcaactttgttcaccggc
acctcggcattctcctcgggtctgtacgacgatgcgctggaaggcgggctgtcgcccgaa
ttccgcgccatctcgatggacgactacgaccacggctcggacttccgctaa
DBGET
integrated database retrieval system
