Paraglaciecola psychrophila: C427_0418
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Entry
C427_0418 CDS
T02535
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00550
Peptidoglycan biosynthesis
gps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C427_0418
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gps01003
]
C427_0418
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gps01011
]
C427_0418
Enzymes [BR:
gps01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C427_0418
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C427_0418
Glycosyltransferases [BR:
gps01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C427_0418
Peptidoglycan biosynthesis and degradation proteins [BR:
gps01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C427_0418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AGH42528
UniProt:
K7AHR2
LinkDB
All DBs
Position
408956..411325
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AA seq
789 aa
AA seq
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MSKIPAGKPKAAAVKTKSTTNASKVSRWILFNPFSWFWRHWGKLLSIFILVIAAYTVYLD
AQISAKFAGNKWQVPAQIYARPMFLSLKQEISIKEIEEELQLLGYRRVTRADSSGEYQLL
RNSIRIQRRKFDFSHGTEDLRNIEISFKDARISQIQDLNSRQSINNIYLEPWLVTRLVSS
GREDRMLVQINDVPPILTQALVAVEDQNFYQHFGVAPLSILRALMANISAGRTVQGGSTL
TQQLVKNLFLTREKSLVRKAKEAMMALIIEVRYNKDVILEAYLNEVFLGQNGDTGVYGFG
LASYFYYDRPLNELRIDEIATLVGIIKGPSYYNPRKYTERALKRRNIVLRSMFESNQLSP
NEYQDLVTLPIKLASGASLKKGKHPAFMDQVRRELRLVLDNPDIRQSGLKVFTTLDSNAQ
MKAERAVSEGVATQEKRIGNSGFEAAMIVTDIDSGEIRSIVGGRNVDYAGFNRALDAKRS
IGSLIKPAIYLTALEQAADYNLATHLIDEPIKLKSTYGKMWEPQNSDKKFRGEVPLLTAL
SRSLNVPTVSLGMDLGLGNIADTIWRLGVEEELDLYPALTLGAVNFSPLQVNQMYQTIAN
NGRYIPLHSITAIMSADDHLLWHFDVVEEQRVDEQATYLLNYALHKVTLEGTAKDVRAKF
PDINMAGKTGTTDDYRDSWFSGFDKNILVTSWIGKDNNQPVNLSGASGAMQLFIAYQQQQ
EPKSLVRRFPDGLGIAHFDNATGHLSKAGCADTFSVPAITSALPPVPSKCFGKSTVPDKP
KSLWEKIFG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatccccgcaggcaaacctaaagctgcagcggtaaaaacaaaatcaaccacc
aacgcatcgaaggtgtcgagatggatactgtttaacccttttagctggttttggcgacat
tggggcaagttactgtctatttttatcctagtgattgcagcttataccgtgtatctcgat
gcacaaattagcgcaaaatttgccggcaataagtggcaagtcccagcccaaatctatgcc
cgtccgatgtttttgagtctaaaacaagaaataagcatcaaagagattgaagaagaatta
caactcttggggtatagaagagtgacccgtgctgatagttcaggcgaataccaattattg
agaaacagtattcgtatccaacgtcgtaaatttgatttctctcatggcacagaagattta
cgtaacattgaaataagtttcaaagatgcgcgcatcagtcaaatacaagatctcaatagt
cgtcaaagtatcaataatatctacctcgaaccatggcttgtcactcgcttggtcagcagc
ggtcgggaagatcgtatgttggtacaaatcaacgatgtcccgcctattttgactcaggca
ttagtcgcagtggaagatcaaaatttttatcagcactttggtgtggcgccgctttctatc
ttgcgggctctaatggccaatatttcggcgggacggaccgttcaaggcggcagtaccctc
actcagcagttggtgaaaaacctgtttttaacccgcgaaaaatcgttggtacgtaaagct
aaagaagccatgatggcgctgatcatagaagtcagatacaacaaagatgtgattctcgag
gcctatttaaacgaagtgtttttggggcaaaacggtgatacgggtgtgtatgggtttggt
ttagccagttatttttattatgatcgccccttaaatgaactgaggattgacgaaattgcc
acattggtaggcattatcaaaggcccttcatattacaatcctcgtaaatacacagagcga
gccctaaaaaggcgcaatatagtgttgcgttcgatgtttgaaagtaatcaattgtcaccc
aatgaatatcaagatttagttacgctgcccattaaactagctagcggcgcgagtttgaag
aagggtaaacatccggcttttatggatcaagtacgacgtgaactacgtttggtattggat
aatccagatattcgccaatcgggtttaaaagtgtttacgactttagactcaaacgcacag
atgaaggccgagcgtgcagtctctgagggagtggcaacacaggaaaaacgtataggcaat
agcggatttgaggcagccatgatagtgaccgatattgattctggggaaattcgttccatt
gtaggtgggcgcaatgttgattacgcaggttttaatagggcgcttgatgccaaacgctct
attggttcattgattaaaccggctatttatcttactgccctagagcaggctgcagactat
aatttagccacacatttaatagatgaacccataaagctaaaaagcacctatggaaaaatg
tgggagccacaaaattcagataaaaaattccgaggtgaagtgcccttgttgactgctttg
agtcggtcgctgaacgtacccactgtctcgttaggtatggatttagggttaggcaatatt
gctgatactatctggcgcttaggggtagaagaagaactcgacttgtatcctgcacttacc
ttgggagcggtaaatttttcgccgctgcaagtgaaccaaatgtatcaaactatcgctaat
aatggccgctacatcccattacattctattactgcgattatgtctgcagatgatcattta
ttatggcactttgatgttgtcgaagaacaacgagtagatgaacaagcgacttacttactt
aattatgcactccacaaagtgacactggaaggtacagcaaaagacgttcgagcaaaattt
cctgatattaatatggctggaaaaaccggtactaccgatgattatcgcgatagctggttt
agtggttttgacaaaaatattctggtgaccagttggatcggcaaagataacaaccaaccg
gttaatttaagtggtgccagtggcgctatgcaattatttattgcttatcagcaacaacaa
gagcctaagtcattggtgaggcgtttccccgatggtctgggtattgctcattttgacaat
gcaacaggtcacttaagcaaagcaggatgtgctgacacctttagtgtgccagccatcacc
tcagcattacccccagtgcctagtaaatgttttggcaaatctactgtgccagataaaccc
aaaagtttgtgggaaaaaatatttggttag
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